RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 MRPS21P82921 87 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 SCN1BQ07699 218 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 TRDNQ13061 729 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 RIPK1Q13546 671 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 GRM4Q14833 912 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 CCDC142Q17RM4 750 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 CAVIN1Q6NZI2 390 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 VSTM1Q6UX27 236 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 ADGRA1Q86SQ6 560 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 SCML4Q8N228 414 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 RTL3Q8N8U3 475 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 C8orf58Q8NAV2 365 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 SLC5A11Q8WWX8 675 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 OVCA2Q8WZ82 227 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 SGF29Q96ES7 293 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 APOPT1Q96IL0 206 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 PRAM1Q96QH2 718 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 SH2D3AQ9BRG2 576 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 RTKNQ9BST9 563 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 INTS2Q9H0H0 1204 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 HSD3B7Q9H2F3 369 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 DPH5Q9H2P9 285 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 DNAJC18Q9H819 358 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 MRPL44Q9H9J2 332 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 BRF2Q9HAW0 419 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 FANCEQ9HB96 536 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 NRIP3Q9NQ35 241 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 PRDM8Q9NQV8 689 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 ATAD3AQ9NVI7 634 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 DDX43Q9NXZ2 648 aaKnown RBP6.07□□□□□ -1.44
SQLE-203ENST00000518931 NINJ2Q9NZG7 142 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 FLRT1Q9NZU1 646 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 DERAQ9Y315 318 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 POMT1Q9Y6A1 747 aa6.07□□□□□ -1.44
SQLE-203ENST00000518931 TRAV34A0A0B4J273 112 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 A8MV72 311 aaPredicted RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 TMCO5BA8MYB1 307 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 CTIFO43310 598 aaKnown RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 DHHO43323 396 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 SLC25A17O43808 307 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 BCAS2O75934 225 aaPredicted RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 CAMTA2O94983 1202 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 ANXA6P08133 673 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 ALADP13716 330 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 NPPBP16860 134 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 CCNA2P20248 432 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 MMP8P22894 467 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 IGHMBP2P38935 993 aaKnown RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 JAK3P52333 1124 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 HAND2P61296 217 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 RAE1P78406 368 aaKnown RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 CSHL1Q14406 222 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 TDRD12Q587J7 1177 aaKnown RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 CEP78Q5JTW2 689 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 C9orf152Q5JTZ5 239 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 SPDYCQ5MJ68 293 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 ADALQ6DHV7 355 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 MSANTD2Q6P1R3 559 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 ARHGAP11AQ6P4F7 1023 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 INO80CQ6PI98 192 aaPredicted RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 TRAT1Q6PIZ9 186 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 FAM160B2Q86V87 743 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 C16orf71Q8IYS4 520 aaPredicted RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 NFKBIDQ8NI38 313 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 PSMA8Q8TAA3 256 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 TRAPPC9Q96Q05 1148 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 HERC2P3Q9BVR0 1158 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 GCOM2Q9BZD3 368 aaPredicted RBP6.06□□□□□ -1.44
SQLE-203ENST00000518931 TRIM7Q9C029 511 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 SLC35D1Q9NTN3 355 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 HMG20BQ9P0W2 317 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 BTBD3Q9Y2F9 522 aa6.06□□□□□ -1.44
SQLE-203ENST00000518931 RNF123Q5XPI4 1314 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 CCDC187A0A096LP49 1063 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 A0A1W2PQ09 198 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 A4D1N5 150 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 LRRC72A6NJI9 287 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 CGB1A6NKQ9 187 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 M0QZQ0 153 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 EBAG9O00559 213 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 PPP6CO00743 305 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 PCDH17O14917 1159 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 DNPH1O43598 174 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 REC8O95072 547 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 GCNT3O95395 438 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 FTCDO95954 541 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 TPOP07202 933 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 ZNF853P0CG23 659 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 UBL4AP11441 157 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 ACTN1P12814 892 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 KRT5P13647 590 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 CSF2RAP15509 400 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 PTAFRP25105 342 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 RFC4P35249 363 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 HSD17B2P37059 387 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 CASP3P42574 277 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 PNLIPRP1P54315 467 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 ALDH18A1P54886 795 aaKnown RBP6.05□□□□□ -1.44
SQLE-203ENST00000518931 YPEL5P62699 121 aa6.05□□□□□ -1.44
SQLE-203ENST00000518931 GRSF1Q12849 480 aaKnown RBP eCLIP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms