RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 ELOA3Q8NG57 546 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 CXorf40AQ8TE69 158 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 CENPTQ96BT3 561 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 NXPE2Q96DL1 559 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 VCPIP1Q96JH7 1222 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 LENG8Q96PV6 779 aaPredicted RBP9.72□□□□□ -0.85
TTC1-202ENST00000518560 LRRC61Q9BV99 259 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 ZWILCHQ9H900 591 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 SP110Q9HB58 689 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 ETNK1Q9HBU6 452 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 NLGN3Q9NZ94 848 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 CWC15Q9P013 229 aaKnown RBP9.72□□□□□ -0.85
TTC1-202ENST00000518560 DKK4Q9UBT3 224 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 IPO11Q9UI26 975 aaKnown RBP9.72□□□□□ -0.85
TTC1-202ENST00000518560 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 CACNA1GO43497 2377 aa9.72□□□□□ -0.85
TTC1-202ENST00000518560 DSPP15924 2871 aaKnown RBP9.72□□□□□ -0.85
TTC1-202ENST00000518560 TSPAN11A1L157 253 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 CPED1A4D0V7 1026 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 ARHGAP42A6NI28 874 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 A8MX80 341 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 DAPK3O43293 454 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 PRPSAP2O60256 369 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 TM7SF2O76062 418 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 RNF8O76064 485 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 PCCBP05166 539 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 C1SP09871 688 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 C6P13671 934 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 DESP17661 470 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 XPAP23025 273 aaPredicted RBP9.71□□□□□ -0.86
TTC1-202ENST00000518560 EIF4A3P38919 411 aaKnown RBP9.71□□□□□ -0.86
TTC1-202ENST00000518560 MMP12P39900 470 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 PBX1P40424 430 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 NDST2P52849 883 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 THOP1P52888 689 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 HNRNPKP61978 463 aaKnown RBP eCLIP9.71□□□□□ -0.86
TTC1-202ENST00000518560 RAD51Q06609 339 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 DPYSQ14117 519 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 WSCD2Q2TBF2 565 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 HS1BP3Q53T59 392 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 PERM1Q5SV97 790 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 AFMIDQ63HM1 303 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 SRLQ86TD4 932 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 PLA2G15Q8NCC3 412 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 IFI44Q8TCB0 444 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 CPLX3Q8WVH0 158 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 CASKIN2Q8WXE0 1202 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 HSPH1Q92598 858 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 FUBP1Q96AE4 644 aaKnown RBP9.71□□□□□ -0.86
TTC1-202ENST00000518560 ARHGEF26Q96DR7 871 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.71□□□□□ -0.86
TTC1-202ENST00000518560 CLPBQ9H078 707 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 THAP2Q9H0W7 228 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 DKK3Q9UBP4 350 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 APOBEC3BQ9UH17 382 aaKnown RBP9.71□□□□□ -0.86
TTC1-202ENST00000518560 CLCA2Q9UQC9 943 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 CELSR3Q9NYQ7 3312 aa9.71□□□□□ -0.86
TTC1-202ENST00000518560 ITPR1Q14643 2758 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PMS2P1A4D2B8 440 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 OPA1O60313 960 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 BRINP1O60477 761 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PALMO75781 387 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 MT-CO3P00414 261 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 MPOP05164 745 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 ALPPL2P10696 532 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 CKMT1AP12532 417 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 GZMAP12544 262 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 GM2AP17900 193 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 TGM2P21980 687 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 GJC1P36383 396 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 LIG3P49916 1009 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 ADKP55263 362 aaKnown RBP9.7□□□□□ -0.86
TTC1-202ENST00000518560 SLC10A7Q0GE19 358 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 RALGDSQ12967 914 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 ILKQ13418 452 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PTPRRQ15256 657 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 UGP2Q16851 508 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 EFL1Q7Z2Z2 1120 aaKnown RBP9.7□□□□□ -0.86
TTC1-202ENST00000518560 RD3Q7Z3Z2 195 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 DCP2Q8IU60 420 aaKnown RBP9.7□□□□□ -0.86
TTC1-202ENST00000518560 SLC35F3Q8IY50 421 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PELI3Q8N2H9 469 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PGBD5Q8N414 524 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PAF1Q8N7H5 531 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 DCBLD1Q8N8Z6 715 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 FNIP1Q8TF40 1166 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 ASB12Q8WXK4 309 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 RFFLQ8WZ73 363 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 TSACCQ96A04 125 aaPredicted RBP9.7□□□□□ -0.86
TTC1-202ENST00000518560 IFT43Q96FT9 208 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 PDXPQ96GD0 296 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 CINPQ9BW66 212 aaPredicted RBP9.7□□□□□ -0.86
TTC1-202ENST00000518560 CPEB1Q9BZB8 566 aaKnown RBP9.7□□□□□ -0.86
TTC1-202ENST00000518560 ISCUQ9H1K1 167 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.7□□□□□ -0.86
TTC1-202ENST00000518560 SIRPGQ9P1W8 387 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 ATP8A1Q9Y2Q0 1164 aa9.7□□□□□ -0.86
TTC1-202ENST00000518560 OR1A2Q9Y585 309 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms