RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 PES1O00541 588 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PPM1DO15297 605 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RASGRP1O95267 797 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 IGSF6O95976 241 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FGF3P11487 239 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 IL4RP24394 825 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 EEF1GP26641 437 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 INHBCP55103 352 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SNX16P57768 344 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 YBEYP58557 167 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TRAF2Q12933 501 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DPYSQ14117 519 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 BECN1Q14457 450 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CNGA3Q16281 694 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TPD52L1Q16890 204 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PARP15Q460N3 678 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 COLEC12Q5KU26 742 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ACBD5Q5T8D3 534 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PLEKHA7Q6IQ23 1121 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LVRNQ6Q4G3 990 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CCDC81Q6ZN84 652 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DPPA4Q7L190 304 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF438Q7Z4V0 828 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CCNJLQ8IV13 435 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FAM46DQ8NEK8 389 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TPCN2Q8NHX9 752 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 HCAR2Q8TDS4 363 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GPBAR1Q8TDU6 330 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FNIP1Q8TF40 1166 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 BTN2A2Q8WVV5 523 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NAT6Q93015 286 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 WDR92Q96MX6 357 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GFM1Q96RP9 751 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CNPY3Q9BT09 278 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SNRNP25Q9BV90 132 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RETREG1Q9H6L5 497 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 UBA2Q9UBT2 640 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 KLQ9UEF7 1012 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LIMA1Q9UHB6 759 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PCSK1NQ9UHG2 260 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PAXBP1Q9Y5B6 917 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PCDHGC4Q9Y5F7 938 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
SCARNA20.3-201ENST00000516913 IGHV5-10-1A0A0J9YXX1 117 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TMEM191CA6NGB0 347 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NPIPB15A6NHN6 443 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LGALS16A8MUM7 142 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TMCO5BA8MYB1 307 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 B4DGG1 531 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DDX3XO00571 662 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NVLO15381 856 aaKnown RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SUV39H1O43463 412 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 HTRA2O43464 458 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SLC28A2O43868 658 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 WISP1O95388 367 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PDHA1P08559 390 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ERCC2P18074 760 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MIPP30301 263 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ETV3P41162 512 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 STAT1P42224 750 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CSNK1DP48730 415 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 UCNP55089 124 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 KIAA1024LP59773 190 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NFATC3Q12968 1075 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MTM1Q13496 603 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PTK2BQ14289 1009 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ELOCQ15369 112 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 C14orf28Q4W4Y0 310 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 HS1BP3Q53T59 392 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SPECC1LQ69YQ0 1117 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ACAD10Q6JQN1 1059 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PNCKQ6P2M8 343 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 Q6ZVL8 140 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF571Q7Z3V5 609 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TECPR1Q7Z6L1 1165 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TRIM74Q86UV6 250 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF761Q86XN6 746 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NAGSQ8N159 534 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FSTL5Q8N475 847 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ARL14Q8N4G2 192 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 OR56A4Q8NGH8 313 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GRAMD1AQ96CP6 724 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 WDR24Q96S15 920 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SLC12A9Q9BXP2 914 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FRMD8Q9BZ67 464 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NUP62CLQ9H1M0 184 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SUDS3Q9H7L9 328 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NOD2Q9HC29 1040 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 OCIAD1Q9NX40 245 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LRIT1Q9P2V4 623 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CNOT6Q9ULM6 557 aaKnown RBP8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 AP4E1Q9UPM8 1137 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TMEM98Q9Y2Y6 226 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ANKRD36A6QL64 1941 aa8.29□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CRYBG3Q68DQ2 2970 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MYO9AB2RTY4 2548 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZSCAN5CA6NGD5 496 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 K7EM74 188 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LRCH4O75427 683 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms