RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 RTL3Q8N8U3 475 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ATP6V0D2Q8N8Y2 350 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SNX31Q8N9S9 440 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 FAM47BQ8NA70 645 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 KLHL23Q8NBE8 558 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PAPD5Q8NDF8 572 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PHC3Q8NDX5 983 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SETD9Q8NE22 299 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ZNF555Q8NEP9 628 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 IPMKQ8NFU5 416 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 OR8J3Q8NGG0 315 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 OR52E4Q8NGH9 312 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 GPR150Q8NGU9 434 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 RNF217Q8TC41 542 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SPPL2BQ8TCT7 592 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 AGR3Q8TD06 166 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 MAPK15Q8TD08 544 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CLEC4CQ8WTT0 213 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 KCTD4Q8WVF5 259 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TRAPPC12Q8WVT3 735 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 GAB3Q8WWW8 586 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TFAP2CQ92754 450 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 USP13Q92995 863 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ISOC1Q96CN7 298 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 AURKBQ96GD4 344 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 FUBP3Q96I24 572 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 MARK4Q96L34 752 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 UBXN10Q96LJ8 280 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 MYRFLQ96LU7 910 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CEP295NLQ96MC4 621 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 FCRL3Q96P31 734 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PLEKHG4BQ96PX9 1271 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CAMKK2Q96RR4 588 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 AGAP2Q99490 1192 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PARK7Q99497 189 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 DOK1Q99704 481 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PKP2Q99959 881 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 KCTD14Q9BQ13 255 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 BEGAINQ9BUH8 593 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 MLPHQ9BV36 600 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 FICDQ9BVA6 458 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 C1QTNF3Q9BXJ4 246 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 UGT2B28Q9BY64 529 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 LRRC3Q9BY71 257 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 OXCT2Q9BYC2 517 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ULBP1Q9BZM6 244 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SHCBP1LQ9BZQ2 653 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CEP44Q9C0F1 390 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 DERL2Q9GZP9 239 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 POLR1EQ9GZS1 481 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 AP5M1Q9H0R1 490 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ING2Q9H160 280 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 DPEP3Q9H4B8 488 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 NXF3Q9H4D5 531 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ALG2Q9H553 416 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 WDR55Q9H6Y2 383 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CAB39LQ9H9S4 337 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 WDR6Q9NNW5 1121 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CCNB1IP1Q9NPC3 277 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 HPS4Q9NQG7 708 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 MAN1C1Q9NR34 630 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CHRAC1Q9NRG0 131 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SDR39U1Q9NRG7 319 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 RGS18Q9NS28 235 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ATAD3AQ9NVI7 634 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 FAIMQ9NVQ4 179 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 IRAK4Q9NWZ3 460 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 COMMD8Q9NX08 183 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TAS2R13Q9NYV9 303 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ZIM2Q9NZV7 527 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CCDC167Q9P0B6 97 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 COX16Q9P0S2 106 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CD300AQ9UGN4 299 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ZDHHC2Q9UIJ5 367 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ANAPC2Q9UJX6 822 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 C3orf18Q9UK00 162 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CNOT6Q9ULM6 557 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 MAPRE3Q9UPY8 281 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 WDR37Q9Y2I8 494 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 GIT1Q9Y2X7 761 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 VWA7Q9Y334 891 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TRAF6Q9Y4K3 522 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 ARIH1Q9Y4X5 557 aaPredicted RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TNPO3Q9Y5L0 923 aaKnown RBP3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SNX5Q9Y5X3 404 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 CEPT1Q9Y6K0 416 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 SLC30A1Q9Y6M5 507 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 NLRC5Q86WI3 1866 aa3.38□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 A0A0J9YVX5 310 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 A0A1W2PP18 115 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TTC24A2A3L6 582 aaPredicted RBP3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 FAM234BA2RU67 622 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 C17orf102A2RUQ5 167 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 TRIM64A6NGJ6 449 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 C2orf81A6NN90 581 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 KCNU1A8MYU2 1149 aa3.37□□□□□ -1.87
RNU4ATAC3P-201ENST00000516699 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms