RNA–Protein interactions for RNA: ENST00000516680.1

RNU6-197P-201, Transcript of RNA, U6 small nuclear 197, pseudogene, humanhuman

BASIC

Gene RNU6-197P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-197P-201ENST00000516680 FAM53AQ6NSI3 398 aaPredicted RBP1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 RGMBQ6NW40 437 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 SLC27A1Q6PCB7 646 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 ATF7IPQ6VMQ6 1270 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 HERC6Q8IVU3 1022 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 ZNF440Q8IYI8 595 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 STPG4Q8N801 248 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 GJC3Q8NFK1 279 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 LINS1Q8NG48 757 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 WDR20Q8TBZ3 569 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 ZNF473Q8WTR7 871 aaKnown RBP1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 TM9SF4Q92544 642 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 KTI12Q96EK9 354 aaPredicted RBP1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 SGCZQ96LD1 299 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 LINC00479Q96M42 142 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 TRAPPC9Q96Q05 1148 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 OPRPNQ99935 248 aaPredicted RBP1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 VGLL1Q99990 258 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 NPLQ9BXD5 320 aaPredicted RBP1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 MCM9Q9NXL9 1143 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 CNPY2Q9Y2B0 182 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 AMDHD2Q9Y303 409 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 NFE2L3Q9Y4A8 694 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 PCDHGB5Q9Y5G0 923 aa1.38□□□□□ -2.19
RNU6-197P-201ENST00000516680 COL5A2P05997 1499 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 MEIOCA2RUB1 952 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 AKR1B15C9JRZ8 316 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 H0Y3Z8 333 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 KLK8O60259 260 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CIDEAO60543 219 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 WDR1O75083 606 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 SRSF10O75494 262 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 KRT38O76015 456 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 ERVK-10P10266 1014 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 G6PDP11413 515 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 GPTP24298 496 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CHATP28329 748 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CORO1AP31146 461 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 HNF1BP35680 557 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 PPM1AP35813 382 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TECP42680 631 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 HOXA1P49639 335 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CLCNKAP51800 687 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 KRTAP10-1P60331 282 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 MRPS5P82675 430 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 GALNT1Q10472 559 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TBL3Q12788 808 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 SMAD1Q15797 465 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 SLC18A3Q16572 532 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 PFKFB4Q16877 469 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CCDC96Q2M329 555 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 EIF2S3LQ2VIR3 472 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TCTE1Q5JU00 501 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 GPATCH4Q5T3I0 446 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 ANKRD54Q6NXT1 300 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 SLC36A4Q6YBV0 504 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 ASB18Q6ZVZ8 466 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 MOB3CQ70IA8 216 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TRPT1Q86TN4 253 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 NOXA1Q86UR1 476 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CCDC117Q8IWD4 279 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CCAR1Q8IX12 1150 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 RNF113BQ8IZP6 322 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 AMER3Q8N944 861 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 OR2AK2Q8NG84 335 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 FCAMRQ8WWV6 532 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 HSPH1Q92598 858 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 SNAPC3Q92966 411 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 OTULINQ96BN8 352 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 RNFT2Q96EX2 444 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 MASTLQ96GX5 879 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TMEM41AQ96HV5 264 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 PCYT2Q99447 389 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 SYT17Q9BSW7 474 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TFB2MQ9H5Q4 396 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 TTC12Q9H892 705 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 ERVMER34-1Q9H9K5 563 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 UPF2Q9HAU5 1272 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 DDX4Q9NQI0 724 aaKnown RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CHST12Q9NRB3 414 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 CACNG5Q9UF02 275 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 DLGAP4Q9Y2H0 992 aa1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 KLF2Q9Y5W3 355 aaPredicted RBP1.37□□□□□ -2.19
RNU6-197P-201ENST00000516680 ZNF646O15015 1829 aaPredicted RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 E7EVH7 732 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 FFAR2O15552 330 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 SEPT4O43236 478 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 ARHGEF9O43307 516 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 PRKNO60260 465 aaPredicted RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 CYC1P08574 325 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 HMGB1P09429 215 aaKnown RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 PRG2P13727 222 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 GATA1P15976 413 aaPredicted RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 DPEP1P16444 411 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 ZNF8P17098 575 aaPredicted RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 GATA2P23769 480 aaPredicted RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 PDIA3P30101 505 aaKnown RBP1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 DDIT3P35638 169 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 SERPINF1P36955 418 aa1.36□□□□□ -2.19
RNU6-197P-201ENST00000516680 RBM5P52756 815 aaKnown RBP eCLIP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms