RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 CTPS1P17812 591 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 PTPN3P26045 913 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 PFN3P60673 137 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 SKOR1P84550 965 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 PDE1CQ14123 709 aaPredicted RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 NOMO1Q15155 1222 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 SHBQ15464 509 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 SLC14A2Q15849 920 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 CNGA3Q16281 694 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 WSCD2Q2TBF2 565 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 GATAD2AQ86YP4 633 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 ACTL9Q8TC94 416 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 SAP25Q8TEE9 199 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 HTR3CQ8WXA8 447 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 CAMK1GQ96NX5 476 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 ALS2CR12Q96Q35 445 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 MCCC1Q96RQ3 725 aaPredicted RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 CDC6Q99741 560 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 ADGRE3Q9BY15 652 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 GLOD4Q9HC38 313 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 GPR27Q9NS67 375 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 KLHL8Q9P2G9 620 aaPredicted RBP12.52□□□□□ -0.41
PTCD2-210ENST00000515198 PCOLCE2Q9UKZ9 415 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 SPTBN4Q9H254 2564 aa12.52□□□□□ -0.41
PTCD2-210ENST00000515198 A0A0J9YYE9 177 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 CAPN8A6NHC0 703 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 H3BM21 787 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 DDX3YO15523 660 aaKnown RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 ZNF189O75820 626 aaPredicted RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 TRBC1P01850 177 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 PCCBP05166 539 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 ZNF30P17039 623 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 HNF1BP35680 557 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 SIM1P81133 766 aaPredicted RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 MTM1Q13496 603 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 FZD2Q14332 565 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 N4BP2L1Q5TBK1 243 aaPredicted RBP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 AADACL2Q6P093 401 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 PID1Q7Z2X4 250 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 PARGQ86W56 976 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 SLC22A18ASQ8N1D0 253 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 TTC13Q8NBP0 860 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 NUS1Q96E22 293 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCD2-210ENST00000515198 HERPUD2Q9BSE4 406 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 LAMA1P25391 3075 aa12.51□□□□□ -0.41
PTCD2-210ENST00000515198 SPAARA0A1B0GVQ0 90 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 SDC3O75056 442 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 CBFA2T3O75081 653 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 STK10O94804 968 aaKnown RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 PRLP01236 227 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 CSF2P04141 144 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 ADRB1P08588 477 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 ALPIP09923 528 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 RBP3P10745 1247 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 HTR1BP28222 390 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 RBL1P28749 1068 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 TNNT3P45378 269 aaPredicted RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 EIF3EP60228 445 aaKnown RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 HNRNPKP61978 463 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 WASHC5Q12768 1159 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 BNIP3Q12983 259 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 IHHQ14623 411 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 INPP5AQ14642 412 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 CCDC70Q6NSX1 233 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 ESRP1Q6NXG1 681 aaKnown RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 DARS2Q6PI48 645 aaKnown RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 MACC1Q6ZN28 852 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 ATL2Q8NHH9 583 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 BAHD1Q8TBE0 780 aaPredicted RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 BTN2A2Q8WVV5 523 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 APOOQ9BUR5 198 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 MLPHQ9BV36 600 aaPredicted RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 FTSJ1Q9UET6 329 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 TRHDEQ9UKU6 1024 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 BTBD3Q9Y2F9 522 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 PPP2R2CQ9Y2T4 447 aa12.5□□□□□ -0.41
PTCD2-210ENST00000515198 TDRD6O60522 2096 aaKnown RBP12.5□□□□□ -0.41
PTCD2-210ENST00000515198 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
PTCD2-210ENST00000515198 NEMP2A6NFY4 417 aa12.49□□□□□ -0.41
PTCD2-210ENST00000515198 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
PTCD2-210ENST00000515198 ANKRD66B4E2M5 251 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms