RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SCRN2Q96FV2 425 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 HERC2P3Q9BVR0 1158 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 CTDSP1Q9GZU7 261 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 ARFGAP3Q9NP61 516 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 CNGB3Q9NQW8 809 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 KLRF2D3W0D1 207 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 PTPN2P17706 415 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 HNF1BP35680 557 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 NR1H2P55055 460 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 EDRF1Q3B7T1 1238 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 GPATCH4Q5T3I0 446 aaKnown RBP3.55□□□□□ -1.84
NEDD4-211ENST00000514893 RGMBQ6NW40 437 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 FMNL3Q8IVF7 1028 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF440Q8IYI8 595 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 DSELQ8IZU8 1212 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 STPG4Q8N801 248 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 AGBL3Q8NEM8 1001 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 GJC3Q8NFK1 279 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 FAM222BQ8WU58 562 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 KTI12Q96EK9 354 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-211ENST00000514893 STAMBPL1Q96FJ0 436 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 TNIP3Q96KP6 325 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 ART5Q96L15 291 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 OPRPNQ99935 248 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-211ENST00000514893 POLR3CQ9BUI4 534 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-211ENST00000514893 ERVMER34-1Q9H9K5 563 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 UPF2Q9HAU5 1272 aaKnown RBP3.55□□□□□ -1.84
NEDD4-211ENST00000514893 SMYD2Q9NRG4 433 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF624Q9P2J8 865 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-211ENST00000514893 CD207Q9UJ71 328 aa3.55□□□□□ -1.84
NEDD4-211ENST00000514893 COL5A2P05997 1499 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ADGRF5Q8IZF2 1346 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ARHGAP10A1A4S6 786 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 SH2B2O14492 632 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-211ENST00000514893 WDR1O75083 606 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 CSF1P09603 554 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ITGA2P17301 1181 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ITGAXP20702 1163 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 RRM1P23921 792 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 EFNA5P52803 228 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 PDE1BQ01064 536 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 GTF2H2Q13888 395 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 HLTFQ14527 1009 aaKnown RBP eCLIP3.54□□□□□ -1.84
NEDD4-211ENST00000514893 SMAD1Q15797 465 aaKnown RBP3.54□□□□□ -1.84
NEDD4-211ENST00000514893 SLC18A3Q16572 532 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 GTF2H2CQ6P1K8 395 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 METTL7BQ6UX53 244 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 C15orf39Q6ZRI6 1047 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 TBC1D26Q86UD7 250 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 C1orf87Q8N0U7 546 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ANKRD52Q8NB46 1076 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 SCCPDHQ8NBX0 429 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 TRIM58Q8NG06 486 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 OR6Y1Q8NGX8 325 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 SGCZQ96LD1 299 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF354BQ96LW1 612 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF570Q96NI8 536 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 SYT17Q9BSW7 474 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 CDK19Q9BWU1 502 aa3.54□□□□□ -1.84
NEDD4-211ENST00000514893 CISD1Q9NZ45 108 aaKnown RBP3.54□□□□□ -1.84
NEDD4-211ENST00000514893 A0A0G2JLW4 131 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 MEIOCA2RUB1 952 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 H0Y3Z8 333 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 SORBS2O94875 1100 aaKnown RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 NBPF7P0C2Y1 421 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 PRSS56P0CW18 603 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF26P17031 533 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 PPM1AP35813 382 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 RAD23BP54727 409 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 SH3KBP1Q96B97 665 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF653Q96CK0 615 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 ZC3HAV1LQ96H79 300 aaKnown RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF414Q96IQ9 312 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 TAF1DQ9H5J8 278 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 CCDC177Q9NQR7 707 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 MAP3K20Q9NYL2 800 aaKnown RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-211ENST00000514893 C2CD2Q9Y426 696 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
NEDD4-211ENST00000514893 CACNA1FO60840 1977 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 A0A0U1RQF3 1178 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 SKAP2O75563 359 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-211ENST00000514893 KRT38O76015 456 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 CHRM4P08173 479 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 CD72P21854 359 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 SERPINF1P36955 418 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 DCTP40126 519 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 YWHAZP63104 245 aaKnown RBP3.52□□□□□ -1.85
NEDD4-211ENST00000514893 ITGA9Q13797 1035 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 SIRPB2Q5JXA9 342 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 STXBP5Q5T5C0 1151 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 SLC36A4Q6YBV0 504 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 ASB18Q6ZVZ8 466 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 TAOK1Q7L7X3 1001 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 ZNF34Q8IZ26 560 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 FGFBP3Q8TAT2 258 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 DUSP19Q8WTR2 217 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 RNFT2Q96EX2 444 aa3.52□□□□□ -1.85
NEDD4-211ENST00000514893 TLR8Q9NR97 1041 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms