RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	AGRP	O00253	132 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	MEN1	O00255	615 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	VWA5A	O00534	786 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	APOL1	O14791	398 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SCO2	O43819	266 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	UGT2B11	O75310	529 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	PARN	O95453	639 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	C2	P06681	752 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	NCK1	P16333	377 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	GP5	P40197	560 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ALDH7A1	P49419	539 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ILF2	Q12905	390 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	DGCR6	Q14129	220 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SCUBE3	Q8IX30	993 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	C4orf19	Q8IY42	314 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZNF560	Q96MR9	790 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	RNF157	Q96PX1	679 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	LRRC40	Q9H9A6	602 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	IL37	Q9NZH6	218 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZNF221	Q9UK13	617 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ATP6AP2	A0A1C7CYW4	349 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ATP6AP2	O75787	350 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	HSPA1A	P0DMV8	641 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	HSPA1B	P0DMV9	641 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	GTF2E2	P29084	291 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	TGFBR1	P36897	503 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SNRPF	P62306	86 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	TUBA3C	Q13748	450 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ACAP2	Q15057	778 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	DCAF15	Q66K64	600 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	RPS27L	Q71UM5	84 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ACOT1	Q86TX2	421 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CELF2-AS1	Q8N7Q2	184 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	HMGCLL1	Q8TB92	370 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CNDP2	Q96KP4	475 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CPXM1	Q96SM3	734 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	TEX13B	Q9BXU2	312 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	C2orf40	Q9H1Z8	148 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	PIF1	Q9H611	641 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	EXD2	Q9NVH0	621 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	UBP1	Q9NZI7	540 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLC39A10	Q9ULF5	831 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLC22A2	O15244	555 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SNX2	O60749	519 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	TBXAS1	P24557	533 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	AXL	P30530	894 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	FMO4	P31512	558 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	MAGEA3	P43357	314 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	ARPP19	P56211	112 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CRY1	Q16526	586 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CTF1	Q16619	201 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	AASDH	Q4L235	1098 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLFN12L	Q6IEE8	588 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	OTOP3	Q7RTS5	596 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPNS2	Q8IVW8	549 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	FBXO16	Q8IX29	292 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	PNPT1	Q8TCS8	783 aa	Known RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	TTYH2	Q9BSA4	534 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	OR2B2	Q9GZK3	357 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CPNE5	Q9HCH3	593 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	SYBU	Q9NX95	663 aa		11.17	□□□□□ -0.62
PDCD6-210	ENST00000513582	TBKBP1	A7MCY6	615 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	SNRPB2	P08579	225 aa	Known RBP	11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	YBX3	P16989	372 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	1e-8	■□□□□ 8.4
PDCD6-210	ENST00000513582	ARNT	P27540	789 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	YBX1	P67809	324 aa	Known RBP	11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	PPP2R2B	Q00005	443 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	GALK2	Q01415	458 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	TNFAIP2	Q03169	654 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLC12A1	Q13621	1099 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	MEP1A	Q16819	746 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	DGUOK	Q16854	277 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	ADPRM	Q3LIE5	342 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	COLEC12	Q5KU26	742 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	RNF135	Q8IUD6	432 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	URGCP	Q8TCY9	931 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	TMEM174	Q8WUU8	243 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	YME1L1	Q96TA2	773 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	MED10	Q9BTT4	135 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	VPS33B	Q9H267	617 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	PSME4	Q14997	1843 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	SYCE1L	A8MT33	242 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	UBD	O15205	165 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	NRP2	O60462	931 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	ALDH1A2	O94788	518 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	CAPN1	P07384	714 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	NCS1	P62166	190 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	GBE1	Q04446	702 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	LIPM	Q5VYY2	423 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	STEAP3	Q658P3	488 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	PMF1	Q6P1K2	205 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	LYSMD2	Q8IV50	215 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLC22A15	Q8IZD6	547 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	MAP6	Q96JE9	813 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	LPIN3	Q9BQK8	851 aa		11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZNF717	Q9BY31	904 aa	Predicted RBP	11.16	□□□□□ -0.62
PDCD6-210	ENST00000513582	MRPL4	Q9BYD3	311 aa	Known RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms