RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 EEF1DP29692 281 aaKnown RBP13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 MTTPP55157 894 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 NR6A1Q15406 480 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 IMPG1Q17R60 797 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 AGMOQ6ZNB7 445 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 RNF168Q8IYW5 571 aaPredicted RBP13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 CBR4Q8N4T8 237 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 TSPAN14Q8NG11 270 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 GATA6Q92908 595 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 GFM2Q969S9 779 aaKnown RBP13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 RCOR3Q9P2K3 495 aaPredicted RBP13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 KCNH4Q9UQ05 1017 aa13.71□□□□□ -0.22
AP001999.1-201ENST00000513405 TRIM38O00635 465 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 PSMD3O43242 534 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 AXLP30530 894 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 REP15Q6BDI9 236 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 ZNF280BQ86YH2 543 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 GALNT15Q8N3T1 639 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 FBXO30Q8TB52 745 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 FIG4Q92562 907 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 TMEM74Q96NL1 305 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 GPR22Q99680 433 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 CINPQ9BW66 212 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 GDAP2Q9NXN4 497 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 DERAQ9Y315 318 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 ARHGAP10A1A4S6 786 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 TMEM114B3SHH9 223 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 PTGES3LE9PB15 166 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 F2P00734 622 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 HMOX2P30519 316 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 ZBTB6Q15916 424 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 GSTA3Q16772 222 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 SAPCD2Q86UD0 394 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 SYT17Q9BSW7 474 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 HS3ST4Q9Y661 456 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 ZBTB11O95625 1053 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 SERPINF2P08697 491 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 KCNQ1P51787 676 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 TRIM32Q13049 653 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 MSLNQ13421 630 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 RABL3Q5HYI8 236 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 INTS6LQ5JSJ4 861 aaKnown RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 OTUD1Q5VV17 481 aaPredicted RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 GLT6D1Q7Z4J2 308 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 NUDT8Q8WV74 236 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 C17orf80Q9BSJ5 609 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 PAIP1Q9H074 479 aaKnown RBP13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 PREBQ9HCU5 417 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 PKP3Q9Y446 797 aa13.7□□□□□ -0.22
AP001999.1-201ENST00000513405 CLOCKO15516 846 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 CCNT2O60583 730 aaKnown RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 GSRP00390 522 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 GOT2P00505 430 aaKnown RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 RAB27AP51159 221 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 DIO3P55073 304 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 GALNT2Q10471 571 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 NAB1Q13506 487 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 TAF2Q6P1X5 1199 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 STK32CQ86UX6 486 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 PGAM4Q8N0Y7 254 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 CARNMT1Q8N4J0 409 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 SDCCAG3Q96C92 435 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 RMND5BQ96G75 393 aaPredicted RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 KLHL32Q96NJ5 620 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 HGH1Q9BTY7 390 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 ARMC7Q9H6L4 198 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 TBC1D13Q9NVG8 400 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 EVLQ9UI08 416 aaPredicted RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 NPEPPSL1A6NEC2 478 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 SLCO1B7G3V0H7 640 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 MATN3O15232 486 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 IRAK2O43187 625 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 TOMM70O94826 608 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 S100BP04271 92 aaPredicted RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 FESP07332 822 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 PSMA4P25789 261 aaKnown RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 MAGEA3P43357 314 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 RPL5P46777 297 aaKnown RBP13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 RPS6KA3P51812 740 aa13.69□□□□□ -0.22
AP001999.1-201ENST00000513405 CDKL1Q00532 357 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms