RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 UBR7Q8N806 425 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 CDYL2Q8N8U2 506 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ZFP28Q8NHY6 868 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ACTRT2Q8TDY3 377 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 PIGOQ8TEQ8 1089 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 IPO4Q8TEX9 1081 aaKnown RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 DPF1Q92782 380 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 KIFAP3Q92845 792 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 IGSF8Q969P0 613 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 C18orf25Q96B23 403 aaPredicted RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SARAFQ96BY9 339 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 HIC2Q96JB3 615 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SENP8Q96LD8 212 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 MTMR9Q96QG7 549 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 NEU1Q99519 415 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ELF4Q99607 663 aaPredicted RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SEPT5Q99719 369 aaPredicted RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 GABRG3Q99928 467 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 NUP58Q9BVL2 599 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 CCSER1Q9C0I3 900 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 LSG1Q9H089 658 aaKnown RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 CDT1Q9H211 546 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 C17orf75Q9HAS0 396 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 IL21RQ9HBE5 538 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 TUFT1Q9NNX1 390 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 EMC7Q9NPA0 242 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 TBCCD1Q9NVR7 557 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 VPS54Q9P1Q0 977 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 DEC1Q9P2X7 70 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 PCDHB6Q9Y5E3 794 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ENTPD2Q9Y5L3 495 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 WNT6Q9Y6F9 365 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ANK1P16157 1881 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ANAPC1Q9H1A4 1944 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ITPR2Q14571 2701 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 TTC26A0AVF1 554 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CLEC18AA5D8T8 446 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 MEI4A8MW99 385 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 K7ENP7 123 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 PIRO00625 290 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 YKT6O15498 198 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 GPR39O43194 453 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 USO1O60763 962 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 TOM1L1O75674 476 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SOAT2O75908 522 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 DEXIO95424 95 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 LDOC1O95751 146 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 IGLV3-19P01714 112 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 PRKCGP05129 697 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 EDN1P05305 212 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CLTAP09496 248 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CLEC2LP0C7M8 214 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SCP2P22307 547 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 PTX3P26022 381 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 NMT1P30419 496 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CCT8P50990 548 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 EVCP57679 992 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 OSTNP61366 133 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC7A9P82251 487 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 AMPD3Q01432 767 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 BNC1Q01954 994 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 KCNB1Q14721 858 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 STAT4Q14765 748 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 KIF19Q2TAC6 998 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ARL13BQ3SXY8 428 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 TTC22Q5TAA0 569 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ARHGAP40Q5TG30 622 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 DCAF12L1Q5VU92 463 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SPATA1Q5VX52 437 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 B3GNTL1Q67FW5 361 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 INO80CQ6PI98 192 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CLEC18BQ6UXF7 455 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 MAEAQ7L5Y9 396 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 DDX42Q86XP3 938 aaKnown RBP eCLIP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CATSPER3Q86XQ3 398 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ZCCHC9Q8N567 271 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ARL14EPQ8N8R7 260 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 DCBLD1Q8N8Z6 715 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF610Q8N9Z0 462 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 CLEC18CQ8NCF0 446 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 TFAP2CQ92754 450 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SKA1Q96BD8 255 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 GRAMD1AQ96CP6 724 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 MRGPRX1Q96LB2 322 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC22A12Q96S37 553 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ACBD6Q9BR61 282 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 RPF1Q9H9Y2 349 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 STARD5Q9NSY2 213 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 SPTLC3Q9NUV7 552 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 MAGED2Q9UNF1 606 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 BTBD3Q9Y2F9 522 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 ANKRD6Q9Y2G4 727 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 NOX1Q9Y5S8 564 aa3.86□□□□□ -1.79
PDLIM5-218ENST00000513341 MYOFQ9NZM1 2061 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 A0A1B0GTQ1 180 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 A0A1B0GVT2 93 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ANO9A1A5B4 782 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ANTXRLA6NF34 631 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms