RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 RHPN2P1A8MT19 583 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 TNFRSF10CO14798 259 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 HOXC4P09017 264 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 CCNB1P14635 433 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 AK4P27144 223 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 GNA15P30679 374 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 GPR3P46089 330 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 KIAA1024LP59773 190 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 RNASE9P60153 205 aaKnown RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 DEUP1Q05D60 604 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 MTM1Q13496 603 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 POLD3Q15054 466 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 RAB6CQ53S08 254 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 ARHGAP22Q7Z5H3 698 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 FAM129CQ86XR2 697 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 PASD1Q8IV76 773 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 ELOA2Q8IYF1 753 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 NRSN1Q8IZ57 195 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 NAGSQ8N159 534 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 ATL2Q8NHH9 583 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 HAPLN3Q96S86 360 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 KLC2Q9H0B6 622 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 RAB6CQ9H0N0 254 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 UBE2TQ9NPD8 197 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNF4-218ENST00000513284 PPARGC1AQ9UBK2 798 aaKnown RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 KCTD3Q9Y597 815 aa11.23□□□□□ -0.61
RNF4-218ENST00000513284 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
RNF4-218ENST00000513284 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 TCP11X1B4DZS4 312 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 FAM72CH0Y354 149 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 MKRN2OSH3BPM6 223 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 BUB1BO60566 1050 aaPredicted RBP11.22□□□□□ -0.61
RNF4-218ENST00000513284 STK17BO94768 372 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 PIGNO95427 931 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 DLGAP3O95886 979 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 PRF1P14222 555 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 SULT1E1P49888 294 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 MRPL49Q13405 166 aaKnown RBP11.22□□□□□ -0.61
RNF4-218ENST00000513284 UGP2Q16851 508 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 NADK2Q4G0N4 442 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 FAM72AQ5TYM5 149 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 MANEALQ5VSG8 457 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 KLHL10Q6JEL2 608 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 FAM72DQ6L9T8 149 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 TMEM71Q6P5X7 295 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 GJB7Q6PEY0 223 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 ENOSF1Q7L5Y1 443 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 FAM72BQ86X60 149 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 KIAA1143Q96AT1 154 aaPredicted RBP11.22□□□□□ -0.61
RNF4-218ENST00000513284 RNF31Q96EP0 1072 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 EFHD1Q9BUP0 239 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 NOL6Q9H6R4 1146 aaKnown RBP11.22□□□□□ -0.61
RNF4-218ENST00000513284 FBXO8Q9NRD0 319 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 TAAR2Q9P1P5 351 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 DNAI1Q9UI46 699 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 ERRFI1Q9UJM3 462 aaPredicted RBP11.22□□□□□ -0.61
RNF4-218ENST00000513284 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 NEU3Q9UQ49 428 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 CSMD2Q7Z408 3487 aa11.22□□□□□ -0.61
RNF4-218ENST00000513284 ITPR3Q14573 2671 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 TSPAN11A1L157 253 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 A8MU76 341 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 KDELR3O43731 214 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 RECQL5O94762 991 aaPredicted RBP11.21□□□□□ -0.61
RNF4-218ENST00000513284 SORBS2O94875 1100 aaKnown RBP11.21□□□□□ -0.61
RNF4-218ENST00000513284 TMCC1O94876 653 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 F9P00740 461 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 LDLRP01130 860 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 CEACAM5P06731 702 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 STAT1P42224 750 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 STAT5AP42229 794 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 SUOXP51687 545 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 SNX16P57768 344 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 RAB15P59190 212 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 MC1RQ01726 317 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 RALGDSQ12967 914 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 ERV3-1Q14264 604 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 CYTH1Q15438 398 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.61
RNF4-218ENST00000513284 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 C1orf131Q8NDD1 294 aaKnown RBP11.21□□□□□ -0.61
RNF4-218ENST00000513284 CCDC112Q8NEF3 446 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 KIAA1524Q8TCG1 905 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 HCAR2Q8TDS4 363 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 TEFMQ96QE5 360 aaKnown RBP11.21□□□□□ -0.61
RNF4-218ENST00000513284 TRIM55Q9BYV6 548 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 INTS2Q9H0H0 1204 aaKnown RBP11.21□□□□□ -0.61
RNF4-218ENST00000513284 DONSONQ9NYP3 566 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 RRN3Q9NYV6 651 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 LHX3Q9UBR4 397 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 PLEKHM1Q9Y4G2 1056 aa11.21□□□□□ -0.61
RNF4-218ENST00000513284 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.21□□□□□ -0.61
RNF4-218ENST00000513284 AKAP9Q99996 3911 aa11.21□□□□□ -0.62
RNF4-218ENST00000513284 NF1P21359 2839 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms