RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 NR1D2Q14995 579 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 CXCL17Q6UXB2 119 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ISLR2Q6UXK2 745 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 TDRPQ86YL5 185 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 POMGNT2Q8NAT1 580 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 CPT1BQ92523 772 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 CPXM1Q96SM3 734 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 SLC9A8Q9Y2E8 581 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 SAMHD1Q9Y3Z3 626 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 PLSCR1O15162 318 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 TBL1XO60907 577 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 TSPAN8P19075 237 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 XKR6Q5GH73 641 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 OR52E6Q96RD3 313 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 COPS8Q99627 209 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 BCL9LQ86UU0 1499 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 HMGB3O15347 200 aaKnown RBP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 ZW10O43264 779 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 OR6A2O95222 327 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 SMARCB1Q12824 385 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 PLD5Q8N7P1 536 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 HEXDCQ8WVB3 486 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 NMUR2Q9GZQ4 415 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 BPIFA1Q9NP55 256 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 LRCH4O75427 683 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 MAXP61244 160 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 ZNHIT3Q15649 155 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 NDUFAF6Q330K2 333 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 LSM12Q3MHD2 195 aaKnown RBP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 KLHL31Q9H511 634 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 ST3GAL5Q9UNP4 418 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 MDM4O15151 490 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 EPORP19235 508 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 SLC1A5Q15758 541 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 SLC5A9Q2M3M2 681 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 EFCAB3Q8N7B9 438 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 TM6SF2Q9BZW4 377 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 TTYH3Q9C0H2 523 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 POLR1DQ9Y2S0 133 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 MFHAS1Q9Y4C4 1052 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 DHX15O43143 795 aaKnown RBP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 NDUFB5O43674 189 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 SERPINB7O75635 380 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 IPO13O94829 963 aaKnown RBP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 CDK9P50750 372 aaKnown RBP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 UGT2B15P54855 530 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 CERCAMQ5T4B2 595 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 LEMD2Q8NC56 503 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 QKIQ96PU8 341 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL11A1-210ENST00000512756 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 FBXO10Q9UK96 956 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 SLIT3O75094 1523 aa12.5□□□□□ -0.41
COL11A1-210ENST00000512756 A0A0J9YYE9 177 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CLDN5O00501 218 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PAGE1O75459 146 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ADSLP30566 484 aaPredicted RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 MC4RP32245 332 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PRKAG1P54619 331 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 SCIMPQ6UWF3 145 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CAB39LQ9H9S4 337 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ETAA1Q9NY74 926 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CBFA2T3O75081 653 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PRDX6P30041 224 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 GPR1P46091 355 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 ZNF846Q147U1 533 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 USP41Q3LFD5 358 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 HIPK1Q86Z02 1210 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 SPATA6LQ8N4H0 392 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 OR2T12Q8NG77 320 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 GRIN3AQ8TCU5 1115 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 PPP1R14AQ96A00 147 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 OMA1Q96E52 524 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 SAMD4AQ9UPU9 718 aaKnown RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 C5orf60A6NFR6 353 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 SUV39H1O43463 412 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TLR5O60602 858 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 NR2F1P10589 423 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 BIKQ13323 160 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TCEA2Q15560 299 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CPSF6Q16630 551 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 KLHL12Q53G59 568 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 SLC26A9Q7LBE3 791 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 CNTD1Q8N815 330 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TLCD1Q96CP7 247 aa12.49□□□□□ -0.41
COL11A1-210ENST00000512756 TEFMQ96QE5 360 aaKnown RBP12.49□□□□□ -0.41
COL11A1-210ENST00000512756 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms