RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 GRB7Q14451 532 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 ADRM1Q16186 407 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 TTC33Q6PID6 262 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 LARP4Q71RC2 724 aaKnown RBP eCLIP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 GPR142Q7Z601 462 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CASP10Q92851 521 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 NSUN5Q96P11 429 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 RANBP9Q96S59 729 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 SOX17Q9H6I2 414 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 RRN3Q9NYV6 651 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CNOT11Q9UKZ1 510 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 WDR90Q96KV7 1748 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 BPTFQ12830 3046 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 TMX2-CTNND1H3BSU7 103 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 J3KR12 359 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 F2P00734 622 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 SH3BP2P78314 561 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 UNC50Q53HI1 259 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 IQSEC1Q6DN90 963 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 ISCA2Q86U28 154 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 OR2T34Q8NGX1 318 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 OR2T3Q8NH03 318 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 C19orf60Q96EN9 201 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 MID1IP1Q9NPA3 183 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 FAF1Q9UNN5 650 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 TNS1Q9HBL0 1735 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 POMCP01189 267 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CCR1P32246 355 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 EMP3P54852 163 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 DSC2Q02487 901 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 NHSL2Q5HYW2 709 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 SCIMPQ6UWF3 145 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 LRRTM3Q86VH5 581 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 OFCC1Q8IZS5 231 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 PTGR2Q8N8N7 351 aaPredicted RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 TTC16Q8NEE8 873 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CYGBQ8WWM9 190 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 PTERQ96BW5 349 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 TUBGCP3Q96CW5 907 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CCDC126Q96EE4 140 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 TBATAQ96M53 351 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CLK4Q9HAZ1 481 aaKnown RBP9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 SMOXQ9NWM0 555 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 CDH9Q9ULB4 789 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 DNAJC15Q9Y5T4 150 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 A0A0G2JMZ2 1700 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 LRRC37A2A6NM11 1700 aa9.28□□□□□ -0.92
LIMCH1-215ENST00000512632 IRAK2O43187 625 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 ZNF189O75820 626 aaPredicted RBP9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 IMPDH1P20839 514 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 CASP2P42575 452 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 ALDH3B2P48448 385 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 PSEN2P49810 448 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 SERPINH1P50454 418 aaKnown RBP9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 APLP1P51693 650 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 SLC10A7Q0GE19 358 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 TRAP1Q12931 704 aaKnown RBP9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 PFKFB4Q16877 469 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 FUT11Q495W5 492 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 SDHAF4Q5VUM1 108 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 CHST15Q7LFX5 561 aaPredicted RBP9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 PCYOX1LQ8NBM8 494 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 DNAJB14Q8TBM8 379 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 TCF12Q99081 682 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 RGS17Q9UGC6 210 aaPredicted RBP9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 EBF1Q9UH73 591 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 CDC14AQ9UNH5 594 aa9.27□□□□□ -0.92
LIMCH1-215ENST00000512632 LOC285556D6RIA3 1793 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 PLXNA1Q9UIW2 1896 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 BTBD19C9JJ37 291 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 LINC00032P0C843 101 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 MTHFD1P11586 935 aaKnown RBP9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 CAPN3P20807 821 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 CDK9P50750 372 aaKnown RBP9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 IHHQ14623 411 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 LPIN1Q14693 890 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 BORAQ6PGQ7 559 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 SLC15A3Q8IY34 581 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 TRPC4APQ8TEL6 797 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 UBXN10Q96LJ8 280 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 CATSPERBQ9H7T0 1116 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 NEU3Q9UQ49 428 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 PTCH2Q9Y6C5 1203 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 DHRS12A0PJE2 317 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 UBXN8O00124 270 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 PIP5K1BO14986 540 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 INPP4BO15327 924 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 GJB3O75712 270 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 GPX3P22352 226 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 PCSK1P29120 753 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 PSMD8P48556 350 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 POLD2P49005 469 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 ENTPD1P49961 510 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 CLCN5P51795 746 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 CRYBB1P53674 252 aaPredicted RBP9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 MAPK10P53779 464 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 ACAP2Q15057 778 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 ZNF678Q5SXM1 525 aa9.27□□□□□ -0.93
LIMCH1-215ENST00000512632 SCN4BQ8IWT1 228 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms