RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 UNC13CQ8NB66 2214 aa6.82□□□□□ -1.32
COPS4-209ENST00000511653 SPTBN1Q01082 2364 aaKnown RBP6.82□□□□□ -1.32
COPS4-209ENST00000511653 LRRK1Q38SD2 2015 aa6.82□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3DA0A087WVF3 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3IA0A087WXS9 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3EA0A087X179 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3KA0A087X1G2 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 A0A1W2PQ27 194 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 A0A1W2PQ64 194 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TYW5A2RUC4 315 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3FA6NER0 549 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3LB9A6J9 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 RNF103O00237 685 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TRIM38O00635 465 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 YKT6O15498 198 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 IGLV3-25P01717 112 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 IGHA1P01876 353 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3HP0C7X1 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 C5AR1P21730 350 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 RXRGP48443 463 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 RPL34P49207 117 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 ARRB1P49407 418 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 CCDC173Q0VFZ6 552 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 CNTN1Q12860 1018 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ELAVL3Q14576 367 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 AGBL4Q5VU57 503 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3GQ6DHY5 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3CQ6IPX1 549 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 NAPEPLDQ6IQ20 393 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 CXorf57Q6NSI4 855 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 DENND1BQ6P3S1 775 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 RRAGAQ7L523 313 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ERICH1Q86X53 443 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 DTX1Q86Y01 620 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TBC1D3Q8IZP1 549 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 NXPE1Q8N323 547 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PPM1KQ8N3J5 372 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 OR52K2Q8NGK3 314 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.81□□□□□ -1.32
COPS4-209ENST00000511653 HSFY1Q96LI6 401 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 NT5C1BQ96P26 610 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 MYOCQ99972 504 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ZFYVE21Q9BQ24 234 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PLCD4Q9BRC7 762 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ANP32EQ9BTT0 268 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 SP110Q9HB58 689 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ACP6Q9NPH0 428 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 SAMD15Q9P1V8 674 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 KIAA1257Q9ULG3 409 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 SLC5A6Q9Y289 635 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ATP8A1Q9Y2Q0 1164 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PCDHB1Q9Y5F3 818 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ZNF891A8MT65 544 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 E5RJQ4 531 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PLRG1O43660 514 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 FBXO21O94952 628 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TRUB2O95900 331 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 PRNPP04156 253 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 C1SP09871 688 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PYGMP11217 842 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 MYF5P13349 255 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PLA2G2AP14555 144 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PRLRP16471 622 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 CKMT2P17540 419 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 GLDCP23378 1020 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ACP1P24666 158 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 GPD2P43304 727 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TAS2R38P59533 333 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 NFKB2Q00653 900 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 FKBP3Q00688 224 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 TLE3Q04726 772 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 EIF4EBP2Q13542 120 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 TAF5Q15542 800 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ZNF658Q5TYW1 1059 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 RNF219Q5W0B1 726 aaPredicted RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 CYP2R1Q6VVX0 501 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 KDM7AQ6ZMT4 941 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 CCAR2Q8N163 923 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 SLC25A45Q8N413 288 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ZNF843Q8N446 348 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 DCBLD1Q8N8Z6 715 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 RFFLQ8WZ73 363 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 SKA1Q96BD8 255 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 ALG14Q96F25 216 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 SPAG5Q96R06 1193 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 TSG101Q99816 390 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 PRMT1Q99873 361 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 DDX50Q9BQ39 737 aaKnown RBP6.81□□□□□ -1.32
COPS4-209ENST00000511653 ERVMER34-1Q9H9K5 563 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 FZD3Q9NPG1 666 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 UCKL1Q9NWZ5 548 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 CBLCQ9ULV8 474 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 CLCA2Q9UQC9 943 aa6.81□□□□□ -1.32
COPS4-209ENST00000511653 NOTCH2Q04721 2471 aa6.8□□□□□ -1.32
COPS4-209ENST00000511653 SYNJ2BP-COX16A0A087WUM0 186 aa6.8□□□□□ -1.32
COPS4-209ENST00000511653 F5H5T6 163 aa6.8□□□□□ -1.32
COPS4-209ENST00000511653 RRP8O43159 456 aaKnown RBP6.8□□□□□ -1.32
COPS4-209ENST00000511653 MOCS3O95396 460 aa6.8□□□□□ -1.32
COPS4-209ENST00000511653 APOEP02649 317 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms