RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	NKIRAS1	Q9NYS0	192 aa		10.15	□□□□□ -0.78
FBXO38-215	ENST00000509411	ZMYM5	Q9UJ78	669 aa		10.15	□□□□□ -0.78
FBXO38-215	ENST00000509411	HS3ST2	Q9Y278	367 aa		10.15	□□□□□ -0.78
FBXO38-215	ENST00000509411	DOCK8	Q8NF50	2099 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ERICH4	A6NGS2	130 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	COPE	O14579	308 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	HOXC11	O43248	304 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	HTRA2	O43464	458 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ADH5	P11766	374 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	CNTF	P26441	200 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	CRHR1	P34998	444 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	SPR	P35270	261 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	CDKN1C	P49918	316 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	AP1S1	P61966	158 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	SEMG2	Q02383	582 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	SLC20A2	Q08357	652 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ZNF460	Q14592	562 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	PTPRN	Q16849	979 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	LGSN	Q5TDP6	509 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ZNF470	Q6ECI4	717 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ELMSAN1	Q6PJG2	1045 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	NDUFAF2	Q8N183	169 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	OR2AP1	Q8NGE2	309 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	TTC8	Q8TAM2	541 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	BCAS4	Q8TDM0	211 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	NXPE3	Q969Y0	559 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ALKBH8	Q96BT7	664 aa	Known RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	OTUB2	Q96DC9	234 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	CDKN2AIPNL	Q96HQ2	116 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	SGSM3	Q96HU1	749 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	MAGEB18	Q96M61	343 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	GPR22	Q99680	433 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	RPP25	Q9BUL9	199 aa	Known RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	FAM107B	Q9H098	131 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	MFSD1	Q9H3U5	465 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	RHOJ	Q9H4E5	214 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	TRPV4	Q9HBA0	871 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	BPIFA1	Q9NP55	256 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	NLE1	Q9NVX2	485 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	TMEM216	Q9P0N5	145 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	FBXO5	Q9UKT4	447 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	RIMKLB	Q9ULI2	386 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ERVW-1	Q9UQF0	538 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	PLLP	Q9Y342	182 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	PCDHB9	Q9Y5E1	797 aa		10.14	□□□□□ -0.79
FBXO38-215	ENST00000509411	FAM95C	A0A1B0GW59	222 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411		A6NNZ2	444 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	TTC34	A8MYJ7	566 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	PRRT4	C9JH25	899 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	SLC9A3R1	O14745	358 aa	Predicted RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	PHGDH	O43175	533 aa	Known RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	SLC7A4	O43246	635 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	BNIP3L	O60238	219 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	TULP3	O75386	442 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	RPP40	O75818	363 aa	Known RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ZWINT	O95229	277 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	IGSF6	O95976	241 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	S1PR4	O95977	384 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	SLC4A1	P02730	911 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	C2	P06681	752 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	COL9A1	P20849	921 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	LTBR	P36941	435 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	IRX4	P78413	519 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ECT2L	Q008S8	904 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	DLG1	Q12959	904 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	DNAJC3	Q13217	504 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	PEX6	Q13608	980 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	THOC5	Q13769	683 aa	Known RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	GRM2	Q14416	872 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	TAF1A	Q15573	450 aa	Predicted RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	MYLK3	Q32MK0	819 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	TUBB8	Q3ZCM7	444 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	CARD16	Q5EG05	197 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	RALGPS1	Q5JS13	557 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ARMC12	Q5T9G4	340 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ARMC3	Q5W041	872 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ZNF549	Q6P9A3	640 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ATG14	Q6ZNE5	492 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	DPY19L3	Q6ZPD9	716 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411		Q6ZVU0	165 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	GLT6D1	Q7Z4J2	308 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	CLEC14A	Q86T13	490 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	TAX1BP1	Q86VP1	789 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	CEP97	Q8IW35	865 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	PHTF2	Q8N3S3	785 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	RYBP	Q8N488	228 aa	Predicted RBP	10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	OR4K2	Q8NGD2	314 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	FRS2	Q8WU20	508 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	STYX	Q8WUJ0	223 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	CHMP6	Q96FZ7	201 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	NDN	Q99608	321 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	OLFM1	Q99784	485 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	MECR	Q9BV79	373 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	C1QTNF1	Q9BXJ1	281 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	VPS11	Q9H270	941 aa		10.13	□□□□□ -0.79
FBXO38-215	ENST00000509411	SLCO1B3	Q9NPD5	702 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms