RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 TRAPPC9Q96Q05 1148 aa12.92□□□□□ -0.34
SMG7-214ENST00000508461 PTPN18Q99952 460 aa12.92□□□□□ -0.34
SMG7-214ENST00000508461 PKP2Q99959 881 aa12.92□□□□□ -0.34
SMG7-214ENST00000508461 TM6SF2Q9BZW4 377 aa12.92□□□□□ -0.34
SMG7-214ENST00000508461 PKP3Q9Y446 797 aa12.92□□□□□ -0.34
SMG7-214ENST00000508461 A0A0J9YYE9 177 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 VPS26AO75436 327 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 EEF1DP29692 281 aaKnown RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 ACVRL1P37023 503 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 MTTPP55157 894 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 KCNA10Q16322 511 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 FAM219BQ5XKK7 198 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 PDSS2Q86YH6 399 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 DENND1CQ8IV53 801 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 MIER2Q8N344 545 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 OR4K2Q8NGD2 314 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 ZNF483Q8TF39 744 aaPredicted RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 STYXQ8WUJ0 223 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 KIFC1Q9BW19 673 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 FAM192AQ9GZU8 254 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 SLC25A51Q9H1U9 297 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 SF3B1O75533 1304 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■■■ 91.6
SMG7-214ENST00000508461 LRRC14BA6NHZ5 514 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 GOT2P00505 430 aaKnown RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 CEACAM7Q14002 265 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 NR6A1Q15406 480 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 OTUD1Q5VV17 481 aaPredicted RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 REP15Q6BDI9 236 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 LINGO4Q6UY18 593 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 SPPL2CQ8IUH8 684 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 C19orf60Q96EN9 201 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 PCDHGC4Q9Y5F7 938 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 A6NHS1 94 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 CRTAMO95727 393 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 IL1BP01584 269 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 SLC11A2P49281 568 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 SH3BGRP55822 239 aaPredicted RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 CYS1Q717R9 158 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 CENPLQ8N0S6 344 aaPredicted RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 ASIC4Q96FT7 647 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 KCNA7Q96RP8 456 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 ACOX2Q99424 681 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 HGH1Q9BTY7 390 aa12.91□□□□□ -0.34
SMG7-214ENST00000508461 THUMPD3Q9BV44 507 aaKnown RBP12.91□□□□□ -0.34
SMG7-214ENST00000508461 SHROOM3Q8TF72 1996 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 I6L893 689 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 COL6A2P12110 1019 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 CPOXP36551 454 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 PIK3CGP48736 1102 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 FCGRTP55899 365 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 TIGD2Q4W5G0 525 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 ALKAL1Q6UXT8 129 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 APLFQ8IW19 511 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 ZBTB18Q99592 522 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 SYTL2Q9HCH5 934 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 GTF2IRD1Q9UHL9 959 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 PCDHB7Q9Y5E2 793 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 AZIN1O14977 448 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 PCNAP12004 261 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 HCAR3P49019 387 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 UPP1Q16831 310 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 CNPY1Q3B7I2 92 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 ZNF280BQ86YH2 543 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 OR4L1Q8NH43 312 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 OLFM1Q99784 485 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 PRDM5Q9NQX1 630 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 VPS28Q9UK41 221 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 MAFKO60675 156 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 ALDH2P05091 517 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 CD1EP15812 388 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 ARSDP51689 593 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 MS4A2Q01362 244 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 MSLNQ13421 630 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 KIAA0930Q6ICG6 404 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 FAM45BPQ6NSW5 357 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 FBXL22Q6P050 247 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 FAM45AQ8TCE6 357 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 SOCS4Q8WXH5 440 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 IRGQQ8WZA9 623 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 RNF145Q96MT1 663 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 C17orf80Q9BSJ5 609 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 ZBTB26Q9HCK0 441 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
SMG7-214ENST00000508461 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.34
SMG7-214ENST00000508461 H3BMM5 538 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 GABRDO14764 452 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 PIP5K1BO14986 540 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 C1QAP02745 245 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 CTPS1P17812 591 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 GABRB3P28472 473 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 SATB1Q01826 763 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms