RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 ACTL7AQ9Y615 435 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 TEX33O43247 280 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 FBXO21O94952 628 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 NDUFA10O95299 355 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 TRIM49P0CI25 452 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 TRIM49CP0CI26 452 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 CCNB1P14635 433 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 GARSP41250 739 aaKnown RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 PTGIRP43119 386 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 VAMP7P51809 220 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 CDH4P55283 916 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 PITX1P78337 314 aaPredicted RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 GPLD1P80108 840 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 LTBQ06643 244 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 SLC20A2Q08357 652 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 ILF3Q12906 894 aaKnown RBP eCLIP7.23□□□□□ -1.25
VCAN-207ENST00000507162 KYNUQ16719 465 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 ZNF630Q2M218 657 aaPredicted RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 Q71RC1 249 aaPredicted RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 MRGPRGQ86SM5 289 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 KCNMB4Q86W47 210 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 NRROSQ86YC3 692 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 HPS6Q86YV9 775 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 LRRN4CLQ8ND94 238 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 SPATA3Q8NHX4 192 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 SLC35F5Q8WV83 523 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 CHTF18Q8WVB6 975 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 ITLN2Q8WWU7 325 aaPredicted RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 FUBP1Q96AE4 644 aaKnown RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 EEF2KMTQ96G04 330 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 ZSCAN31Q96LW9 406 aaPredicted RBP7.23□□□□□ -1.25
VCAN-207ENST00000507162 BACH2Q9BYV9 841 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 LRRC27Q9C0I9 530 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 FAM204AQ9H8W3 233 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 ST7Q9NRC1 585 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 GPR83Q9NYM4 423 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 FER1L5A0AVI2 2057 aa7.23□□□□□ -1.25
VCAN-207ENST00000507162 CHD5Q8TDI0 1954 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 AKAP6Q13023 2319 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 KIAA1324LA8MWY0 1029 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 M0QYV0 167 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 TNFRSF10CO14798 259 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 GRID2O43424 1007 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 CEACAM4O75871 244 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 MAP3K6O95382 1288 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 POP4O95707 220 aaKnown RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 PLEKP08567 350 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 SLC2A3P11169 496 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 VDRP11473 427 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 KELP23276 732 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 PTPN4P29074 926 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 CCR1P32246 355 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 SERPINH1P50454 418 aaKnown RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 RPS15P62841 145 aaKnown RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 PPP2R2AP63151 447 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 TLE4Q04727 773 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 PPP3CAQ08209 521 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 MTM1Q13496 603 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 RAPGEF1Q13905 1077 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 TSR1Q2NL82 804 aaKnown RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 SKOR2Q2VWA4 1001 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 MYLK3Q32MK0 819 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 ANO6Q4KMQ2 910 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 ALFQ53S48 1182 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 LYPLAL1Q5VWZ2 237 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 FAM199XQ6PEV8 388 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 GDPD4Q6W3E5 623 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 BNC2Q6ZN30 1099 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 CENPQQ7L2Z9 268 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 TFAP2DQ7Z6R9 452 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 NAGSQ8N159 534 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 DCAF4L2Q8NA75 395 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 GOLGA5Q8TBA6 731 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 SEC14L1Q92503 715 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 SEMA4DQ92854 862 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 HSFY1Q96LI6 401 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 OR6C1Q96RD1 312 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 CEP44Q9C0F1 390 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 AKIRIN1Q9H9L7 192 aaPredicted RBP7.22□□□□□ -1.25
VCAN-207ENST00000507162 ATP13A1Q9HD20 1204 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 LHX9Q9NQ69 397 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 DMAC2Q9NW81 257 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 ARHGEF38Q9NXL2 777 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 USP25Q9UHP3 1055 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 FRMD4BQ9Y2L6 1034 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 HS3ST4Q9Y661 456 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 CLIC4Q9Y696 253 aa7.22□□□□□ -1.25
VCAN-207ENST00000507162 SSU72P8A0A1W2PR75 194 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 PRSS38A1L453 326 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 C21orf140B9A014 251 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 O00370 1275 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 KCNN4O15554 427 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 SPAG6O75602 509 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 TMEM63AO94886 807 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 MT-ND3P03897 115 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 STSP08842 583 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 KLK2P20151 261 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 OR1E1P30953 314 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 GNPDA1P46926 289 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms