RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LRRC72A6NJI9 287 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 ERI2A8K979 691 aaKnown RBP20.12■□□□□ 0.81
CTSD-206ENST00000497544 TAF4O00268 1085 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 TTI1O43156 1089 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 PLRG1O43660 514 aaKnown RBP20.12■□□□□ 0.81
CTSD-206ENST00000497544 AP1G1O43747 822 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 SEMA4FO95754 770 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 AGTP01019 485 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 PRKCGP05129 697 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 CYP2A6P11509 494 aaPredicted RBP20.12■□□□□ 0.81
CTSD-206ENST00000497544 CTPS1P17812 591 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 ADCY8P40145 1251 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 ADPRHP54922 357 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 SEMA5AQ13591 1074 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 PTK6Q13882 451 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 GALNT3Q14435 633 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 SPARCL1Q14515 664 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 LRRC73Q5JTD7 316 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 SYCP2LQ5T4T6 812 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 NAPEPLDQ6IQ20 393 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 PRR23BQ6ZRT6 265 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 USP45Q70EL2 814 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 C11orf74Q86VG3 221 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 KLHDC8BQ8IXV7 354 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 SLC25A41Q8N5S1 370 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 OR2T34Q8NGX1 318 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 GAB3Q8WWW8 586 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 SCRN2Q96FV2 425 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 TRIB3Q96RU7 358 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 CARD6Q9BX69 1037 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 GPR174Q9BXC1 333 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 LRRC40Q9H9A6 602 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 PPIL1Q9Y3C6 166 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 TRPM6Q9BX84 2022 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 LOC400499M0QZD8 3231 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 ITPR1Q14643 2758 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 RIOK3O14730 519 aaKnown RBP20.11■□□□□ 0.81
CTSD-206ENST00000497544 TSPAN6O43657 245 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 AP2A1O95782 977 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 APRTP07741 180 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 ITIH2P19823 946 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 HLA-DPA1P20036 260 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 GRIA4P48058 902 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 TERF1P54274 439 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 TAS2R38P59533 333 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 QPCTQ16769 361 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 KCTD11Q693B1 232 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 CEP68Q76N32 757 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 LINC00523Q86TU6 105 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 TBL1YQ9BQ87 522 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 APOL2Q9BQE5 337 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 MBD1Q9UIS9 605 aaPredicted RBP20.11■□□□□ 0.81
CTSD-206ENST00000497544 DMXL2Q8TDJ6 3036 aa20.11■□□□□ 0.81
CTSD-206ENST00000497544 THADAQ6YHU6 1953 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 PLXND1Q9Y4D7 1925 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 A0A0J9YYE9 177 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 A8MX80 341 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 AREL1O15033 823 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 HRO43593 1189 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 TRBC1P01850 177 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 ADRA1AP35348 466 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 LIMK1P53667 647 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 MRPS25P82663 173 aaKnown RBP20.1■□□□□ 0.81
CTSD-206ENST00000497544 RPL6Q02878 288 aaKnown RBP20.1■□□□□ 0.81
CTSD-206ENST00000497544 SRSF5Q13243 272 aaKnown RBP20.1■□□□□ 0.81
CTSD-206ENST00000497544 SLC1A5Q15758 541 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 NEK5Q6P3R8 708 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 RANBP10Q6VN20 620 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 CXorf40AQ8TE69 158 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 PREBQ9HCU5 417 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 CEP192Q8TEP8 1941 aa20.1■□□□□ 0.81
CTSD-206ENST00000497544 RAD51CO43502 376 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 USP12O75317 370 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 FGF1P05230 155 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 ALPIP09923 528 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 VIPR1P32241 457 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 HNF1BP35680 557 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 CHRNA4P43681 627 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 SEMG2Q02383 582 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 OLIG2Q13516 323 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 ARHGEF7Q14155 803 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 TMEM52BQ4KMG9 183 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 SIRPB2Q5JXA9 342 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 PPP1R21Q6ZMI0 780 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 PCGF5Q86SE9 256 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 MMGT1Q8N4V1 131 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 SRPK1Q96SB4 655 aaKnown RBP20.09■□□□□ 0.81
CTSD-206ENST00000497544 TRIM51Q9BSJ1 452 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 EIF2B3Q9NR50 452 aaKnown RBP20.09■□□□□ 0.81
CTSD-206ENST00000497544 B4GALT6Q9UBX8 382 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 ITM2BQ9Y287 266 aa20.09■□□□□ 0.81
CTSD-206ENST00000497544 DOCK9Q9BZ29 2069 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 EFCAB8A8MWE9 144 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 RNGTTO60942 597 aaKnown RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 ATXN1LP0C7T5 689 aaKnown RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 BCKDHBP21953 392 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 SARNPP82979 210 aaKnown RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 CDK16Q00536 496 aa20.08■□□□□ 0.81
CTSD-206ENST00000497544 SIM2Q14190 667 aaPredicted RBP20.08■□□□□ 0.81
CTSD-206ENST00000497544 KIAA0895LQ68EN5 471 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms