RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 C19orf60Q96EN9 201 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 ING2Q9H160 280 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 STN1Q9H668 368 aaKnown RBP11.72□□□□□ -0.53
ATG3-209ENST00000496423 WDCPQ9H6R7 721 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 CHST11Q9NPF2 352 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 ASF1BQ9NVP2 202 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 TRNAU1APQ9NX07 287 aaKnown RBP11.72□□□□□ -0.53
ATG3-209ENST00000496423 TMEM9Q9P0T7 183 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 TAAR2Q9P1P5 351 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 COQ6Q9Y2Z9 468 aa11.72□□□□□ -0.53
ATG3-209ENST00000496423 COPG1Q9Y678 874 aaKnown RBP11.72□□□□□ -0.53
ATG3-209ENST00000496423 PRSS38A1L453 326 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 PPM1DO15297 605 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 KRT86O43790 486 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 COX6B1P14854 86 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 CD1EP15812 388 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 BMP6P22004 513 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 GKP32189 559 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 CSF2RBP32927 897 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 GARSP41250 739 aaKnown RBP11.71□□□□□ -0.53
ATG3-209ENST00000496423 RPL34P49207 117 aaKnown RBP11.71□□□□□ -0.53
ATG3-209ENST00000496423 DNASE1L3Q13609 305 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 STK38Q15208 465 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 ALFQ53S48 1182 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 LRRC73Q5JTD7 316 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 ANKRD40Q6AI12 368 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 TFAP2DQ7Z6R9 452 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 CISD2Q8N5K1 135 aaKnown RBP11.71□□□□□ -0.53
ATG3-209ENST00000496423 Q8NA96 180 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 GALNT6Q8NCL4 622 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 HCAR2Q8TDS4 363 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 CCDC47Q96A33 483 aaKnown RBP11.71□□□□□ -0.53
ATG3-209ENST00000496423 FUBP1Q96AE4 644 aaKnown RBP11.71□□□□□ -0.53
ATG3-209ENST00000496423 HMCESQ96FZ2 354 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 GPR87Q9BY21 358 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 CARS2Q9HA77 564 aaKnown RBP11.71□□□□□ -0.53
ATG3-209ENST00000496423 FGF22Q9HCT0 170 aa11.71□□□□□ -0.53
ATG3-209ENST00000496423 ABCA2Q9BZC7 2435 aa11.71□□□□□ -0.54
ATG3-209ENST00000496423 ANKRD36A6QL64 1941 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 PCSK5Q92824 1860 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 A0A1B0GUH1 482 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 ARGFXA6NJG6 315 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 DRGXA6NNA5 263 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 POLR2DO15514 142 aaKnown RBP11.7□□□□□ -0.54
ATG3-209ENST00000496423 ZMPSTE24O75844 475 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 NADKO95544 446 aaPredicted RBP11.7□□□□□ -0.54
ATG3-209ENST00000496423 BRD2P25440 801 aaKnown RBP11.7□□□□□ -0.54
ATG3-209ENST00000496423 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
ATG3-209ENST00000496423 CASP1P29466 404 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 RPS15P62841 145 aaKnown RBP11.7□□□□□ -0.54
ATG3-209ENST00000496423 GNA12Q03113 381 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 ART3Q13508 389 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 CUL4BQ13620 913 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 IL11RAQ14626 422 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 TESK1Q15569 626 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 UGT8Q16880 541 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 BRMS1LQ5PSV4 323 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 CFAP58Q5T655 872 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 TCERG1LQ5VWI1 586 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 CEP57L1Q8IYX8 460 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 DEFB106AQ8N104 65 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 MMP21Q8N119 569 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 NCSTNQ92542 709 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 SH3KBP1Q96B97 665 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 C1orf74Q96LT6 269 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 GDAP1L1Q96MZ0 367 aa11.7□□□□□ -0.54
ATG3-209ENST00000496423 KLF2Q9Y5W3 355 aaPredicted RBP11.7□□□□□ -0.54
ATG3-209ENST00000496423 CROCCQ5TZA2 2017 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 RASA4BC9J798 803 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 RASA4O43374 803 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 MED7O43513 233 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 KLHL41O60662 606 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 NDUFA10O95299 355 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 IGSF6O95976 241 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
ATG3-209ENST00000496423 BPIP17213 487 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 GGCXP38435 758 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 GPD2P43304 727 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 LIG3P49916 1009 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 NDST2P52849 883 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 SNX16P57768 344 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 PITX1P78337 314 aaPredicted RBP11.69□□□□□ -0.54
ATG3-209ENST00000496423 ARF5P84085 180 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 GRM3Q14832 879 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 VWA2Q5GFL6 755 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 SLC30A9Q6PML9 568 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 SYVN1Q86TM6 617 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 NAGSQ8N159 534 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 ST6GALNAC3Q8NDV1 305 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 NCAPGQ9BPX3 1015 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 TKTL2Q9H0I9 626 aa11.69□□□□□ -0.54
ATG3-209ENST00000496423 WDR26Q9H7D7 661 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms