RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CKMT2P17540 419 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 ACP1P24666 158 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 GARSP41250 739 aaKnown RBP13.26□□□□□ -0.29
ERCC3-209ENST00000494464 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 MMP13P45452 471 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 LIG3P49916 1009 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 THOP1P52888 689 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 LRRC14Q15048 493 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 IRF4Q15306 451 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 ATP13A4Q4VNC1 1196 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 ANKRD20A8PQ5CZ79 823 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 TPRG1LQ5T0D9 272 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 DHRS13Q6UX07 377 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 MACC1Q6ZN28 852 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 DPPA4Q7L190 304 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 DAAM2Q86T65 1068 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 NT5DC3Q86UY8 548 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 VSIG1Q86XK7 387 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 TEX26Q8N6G2 289 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 KCTD6Q8NC69 237 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 ZNF548Q8NEK5 533 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-209ENST00000494464 PCDH19Q8TAB3 1148 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 FATE1Q969F0 183 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 PBKQ96KB5 322 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 TBATAQ96M53 351 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 NSMCE3Q96MG7 304 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 MBNL1Q9NR56 388 aaKnown RBP13.26□□□□□ -0.29
ERCC3-209ENST00000494464 CSNK1G3Q9Y6M4 447 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 TDRD6O60522 2096 aaKnown RBP13.26□□□□□ -0.29
ERCC3-209ENST00000494464 NEMP2A6NFY4 417 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
ERCC3-209ENST00000494464 SCAMP1O15126 338 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 SIGLEC6O43699 453 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 PEX5P50542 639 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
ERCC3-209ENST00000494464 MESDQ14696 234 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 MARC1Q5VT66 337 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 ALG1LQ6GMV1 187 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 TIGD7Q6NT04 549 aaPredicted RBP13.25□□□□□ -0.29
ERCC3-209ENST00000494464 KDM7AQ6ZMT4 941 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 TMPRSS12Q86WS5 348 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
ERCC3-209ENST00000494464 MMGT1Q8N4V1 131 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 NOA1Q8NC60 698 aaKnown RBP13.25□□□□□ -0.29
ERCC3-209ENST00000494464 BTN2A2Q8WVV5 523 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 ZCCHC14Q8WYQ9 949 aaKnown RBP13.25□□□□□ -0.29
ERCC3-209ENST00000494464 MAML1Q92585 1016 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 HES6Q96HZ4 224 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 TSGA13Q96PP4 275 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 ANKZF1Q9H8Y5 726 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 AMACRQ9UHK6 382 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 RAB21Q9UL25 225 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 COQ6Q9Y2Z9 468 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 FREM2Q5SZK8 3169 aa13.25□□□□□ -0.29
ERCC3-209ENST00000494464 MIF4GDA9UHW6 222 aaKnown RBP13.24□□□□□ -0.29
ERCC3-209ENST00000494464 FFAR2O15552 330 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
ERCC3-209ENST00000494464 CPP00450 1065 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 PRKCGP05129 697 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 JUNDP17535 347 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 NFKBIAP25963 317 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 MAXP61244 160 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 MTM1Q13496 603 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 BRD3Q15059 726 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 WSCD2Q2TBF2 565 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 CCDC157Q569K6 752 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 ZNF542PQ5EBM4 170 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 LRRC38Q5VT99 294 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 LIPIQ6XZB0 460 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 PQLC3Q8N755 202 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 FAM181AQ8N9Y4 354 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 SPATA4Q8NEY3 305 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 HDAC11Q96DB2 347 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 POLR1EQ9GZS1 481 aaKnown RBP13.24□□□□□ -0.29
ERCC3-209ENST00000494464 USP29Q9HBJ7 922 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 NOD2Q9HC29 1040 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
ERCC3-209ENST00000494464 KLF15Q9UIH9 416 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 IGF2RP11717 2491 aa13.24□□□□□ -0.29
ERCC3-209ENST00000494464 CCDC151A5D8V7 595 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 TMEM110-MUSTN1A8MSY1 372 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 MATN3O15232 486 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 AQP9O43315 295 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 CAPNS1P04632 268 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 CKMT1AP12532 417 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 MX2P20592 715 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 KDELR1P24390 212 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 CCNCP24863 283 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 MCM3P25205 808 aa13.23□□□□□ -0.29
ERCC3-209ENST00000494464 HNF1BP35680 557 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms