RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RNF111Q6ZNA4 994 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 FRMD7Q6ZUT3 714 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 SPNS2Q8IVW8 549 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 FSTL5Q8N475 847 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 TMCO5AQ8N6Q1 288 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 STYXQ8WUJ0 223 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 CLSTN3Q9BQT9 956 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 RNF208Q9H0X6 261 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 SORCS3Q9UPU3 1222 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ZFP37Q9Y6Q3 630 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 MROH6A6NGR9 719 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 COCHO43405 550 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 HMGA1P17096 107 aaKnown RBP13.83□□□□□ -0.2
VCP-207ENST00000493886 POU4F1Q01851 419 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.2
VCP-207ENST00000493886 EML3Q32P44 896 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 LIPMQ5VYY2 423 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 SLC39A5Q6ZMH5 540 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 DENND1CQ8IV53 801 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 GABPB2Q8TAK5 448 aaPredicted RBP13.83□□□□□ -0.2
VCP-207ENST00000493886 GATA6Q92908 595 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 NXNL1Q96CM4 212 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 ZNF599Q96NL3 588 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 CDH19Q9H159 772 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 MAGEH1Q9H213 219 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 KLHL2O95198 593 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 LYNP07948 512 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 PEX2P28328 305 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 HOXD9P28356 352 aaPredicted RBP13.83□□□□□ -0.2
VCP-207ENST00000493886 MSX2P35548 267 aaPredicted RBP13.83□□□□□ -0.2
VCP-207ENST00000493886 SLC12A2P55011 1212 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 GNA12Q03113 381 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 DLG1Q12959 904 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 ZNF789Q5FWF6 425 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 RBM20Q5T481 1227 aaKnown RBP13.83□□□□□ -0.2
VCP-207ENST00000493886 FAAH2Q6GMR7 532 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 KLHDC10Q6PID8 442 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 OR7D4Q8NG98 312 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 MAPK15Q8TD08 544 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 IFT43Q96FT9 208 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 GPR78Q96P69 363 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 OMDQ99983 421 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 XPR1Q9UBH6 696 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 SPO11Q9Y5K1 396 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 CHD5Q8TDI0 1954 aa13.83□□□□□ -0.2
VCP-207ENST00000493886 MAGEA13PA6NCF6 341 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 TXNDC9O14530 226 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 ZBTB14O43829 449 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 RNASEH1O60930 286 aaKnown RBP13.82□□□□□ -0.2
VCP-207ENST00000493886 SERPINB5P36952 375 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 LEPRP48357 1165 aaKnown RBP13.82□□□□□ -0.2
VCP-207ENST00000493886 PRKAA2P54646 552 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 CDH4P55283 916 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 RPS24P62847 133 aaKnown RBP13.82□□□□□ -0.2
VCP-207ENST00000493886 TLE2Q04725 743 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 SLC9B1Q4ZJI4 515 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
VCP-207ENST00000493886 SPATA6LQ8N4H0 392 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 OR52K2Q8NGK3 314 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 ZNF461Q8TAF7 563 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 A0A087X1B8 175 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 SLC7A4O43246 635 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 GRIA4P48058 902 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 ARSDP51689 593 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 IKBKEQ14164 716 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 SFT2D3Q587I9 215 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 IL31Q6EBC2 164 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 OR6P1Q8NGX9 317 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 HDAC10Q969S8 669 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 PLD4Q96BZ4 506 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 FEM1CQ96JP0 617 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 NDNQ99608 321 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 IRF2BPLQ9H1B7 796 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 COG4Q9H9E3 785 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 S100A14Q9HCY8 104 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 TRPM5Q9NZQ8 1165 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 CDH22Q9UJ99 828 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 ADAMTS6Q9UKP5 1117 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 ASB3Q9Y575 518 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 KCTD3Q9Y597 815 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 ACTL7AQ9Y615 435 aa13.82□□□□□ -0.2
VCP-207ENST00000493886 H3BNC9 293 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 CCL22O00626 93 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 LDB2O43679 373 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 ABLIM3O94929 683 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 KLKB1P03952 638 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 MYL4P12829 197 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 CCL5P13501 91 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 HLA-DPA1P20036 260 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 CLCN5P51795 746 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 AQP4P55087 323 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 PRAMEP78395 509 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 HTRA3P83110 453 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 CCNIQ14094 377 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 SPOUT1Q5T280 376 aaKnown RBP13.81□□□□□ -0.2
VCP-207ENST00000493886 DHDDSQ86SQ9 333 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 CILP2Q8IUL8 1156 aa13.81□□□□□ -0.2
VCP-207ENST00000493886 TDRD5Q8NAT2 981 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms