RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DDX4Q9NQI0 724 aaKnown RBP20.17■□□□□ 0.82
RNF40-203ENST00000493683 TRPS1Q9UHF7 1281 aa20.17■□□□□ 0.82
RNF40-203ENST00000493683 WBP11Q9Y2W2 641 aaKnown RBP20.17■□□□□ 0.82
RNF40-203ENST00000493683 MEGF6O75095 1541 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 TISP43B9A030 160 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 IFNGP01579 166 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 MYBL2P10244 700 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ERCC2P18074 760 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 PRKAG1P54619 331 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 RPTNQ6XPR3 784 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ELMO3Q96BJ8 720 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ZFP14Q9HCL3 533 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ZNF510Q9Y2H8 683 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 GOT1P17174 413 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 DACT2Q5SW24 774 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 IQCKQ8N0W5 287 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 FAM81AQ8TBF8 368 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 SLC9A7Q96T83 725 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 NDNQ99608 321 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 GORASP1Q9BQQ3 440 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 PDCD10Q9BUL8 212 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 TMEM138Q9NPI0 162 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 PLLPQ9Y342 182 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 GRM5P41594 1212 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 SLC7A2P52569 658 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 PEX6Q13608 980 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 PERM1Q5SV97 790 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ALYREFQ86V81 257 aaKnown RBP20.16■□□□□ 0.82
RNF40-203ENST00000493683 OR2T12Q8NG77 320 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 TUBA8Q9NY65 449 aaPredicted RBP20.16■□□□□ 0.82
RNF40-203ENST00000493683 BTRCQ9Y297 605 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 RWDD3Q9Y3V2 267 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 RCCD1A6NED2 376 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 PGRMC2O15173 223 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ABL2P42684 1182 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 ACTR3P61158 418 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 NOMO1Q15155 1222 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 TAPT1Q6NXT6 567 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 CUZD1Q86UP6 607 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 RASAL3Q86YV0 1011 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 EFCAB3Q8N7B9 438 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
RNF40-203ENST00000493683 FFAR3O14843 346 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 GPR42O15529 346 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 ADSLP30566 484 aaPredicted RBP20.15■□□□□ 0.82
RNF40-203ENST00000493683 MARCKSL1P49006 195 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 GMFBP60983 142 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 CNTN2Q02246 1040 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 TMEM109Q9BVC6 243 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 PCDH12Q9NPG4 1184 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 MEIS2O14770 477 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 EPHB6O15197 1021 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 DHX15O43143 795 aaKnown RBP20.15■□□□□ 0.82
RNF40-203ENST00000493683 CCNDBP1O95273 360 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 GPR1P46091 355 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 OMPP47874 163 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 PCDHB1Q9Y5F3 818 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 SAGE2PA6NJ88 616 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 ASGR1P07306 291 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 S100GP29377 79 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 RPL4P36578 427 aaKnown RBP20.15■□□□□ 0.82
RNF40-203ENST00000493683 ATP13A4Q4VNC1 1196 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 OMDQ99983 421 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 TMEM39AQ9NV64 488 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 SCNN1GP51170 649 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 MRPS6P82932 125 aaKnown RBP20.15■□□□□ 0.82
RNF40-203ENST00000493683 SMARCB1Q12824 385 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 AP5B1Q2VPB7 878 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 CCDC80Q76M96 950 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 CCDC36Q8IYA8 594 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 HM13Q8TCT9 377 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 DUSP16Q9BY84 665 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 LMAN2LQ9H0V9 348 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 HBS1LQ9Y450 684 aaKnown RBP20.15■□□□□ 0.82
RNF40-203ENST00000493683 MYPNQ86TC9 1320 aa20.15■□□□□ 0.82
RNF40-203ENST00000493683 WNT10BO00744 389 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 GSC2O15499 205 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 KHDRBS3O75525 346 aaKnown RBP20.14■□□□□ 0.82
RNF40-203ENST00000493683 PFKPQ01813 784 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 HKDC1Q2TB90 917 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 CATSPERGQ6ZRH7 1159 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 PTCHD4Q6ZW05 846 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 PIK3C3Q8NEB9 887 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 DPF3Q92784 378 aa20.14■□□□□ 0.82
RNF40-203ENST00000493683 CLP1Q92989 425 aaKnown RBP20.14■□□□□ 0.82
RNF40-203ENST00000493683 RPTORQ8N122 1335 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 BTN3A3O00478 584 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 CHST10O43529 356 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 TM7SF2O76062 418 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 LCA5LO95447 670 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 LDOC1O95751 146 aaPredicted RBP20.14■□□□□ 0.81
RNF40-203ENST00000493683 CAPSQ13938 189 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 SLC25A52Q3SY17 297 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 AMIGO2Q86SJ2 522 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 LINGO1Q96FE5 620 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 ZNF180Q9UJW8 692 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 AGO1Q9UL18 857 aaKnown RBP20.14■□□□□ 0.81
RNF40-203ENST00000493683 DHFRP00374 187 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms