RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 FAM237AA0A1B0GTK4 181 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 A0A1B0GVM2 712 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CD8B2A6NJW9 211 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 LIPT2A6NK58 231 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 MYO1GB0I1T2 1018 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 AKR1B15C9JRZ8 316 aaPredicted RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 INAFM1C9JVW0 142 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 GTPBP1O00178 669 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 DOK2O60496 412 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 PTP4A3O75365 173 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 MLYCDO95822 493 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 BMP15O95972 392 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 IL7RP16871 459 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 ZNF182P17025 639 aaPredicted RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CD58P19256 250 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CHATP28329 748 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 HOXD3P31249 432 aaPredicted RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 PIGAP37287 484 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 RPL3P39023 403 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 NUDT6P53370 316 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 DRG2P55039 364 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 F2RL1P55085 397 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CEBPZQ03701 1054 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 GPS2Q13227 327 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 NAE1Q13564 534 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CTTNQ14247 550 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 HNF4GQ14541 408 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 ZNF260Q3ZCT1 412 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 TYW3Q6IPR3 259 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 LINGO2Q7L985 606 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 SHFQ7M4L6 423 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 TECPR1Q7Z6L1 1165 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 HAPLN4Q86UW8 402 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 ARHGAP12Q8IWW6 846 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 SLC35F3Q8IY50 421 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CCDC13Q8IYE1 715 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 SCFD2Q8WU76 684 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 ASB5Q8WWX0 329 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CMTM3Q96MX0 182 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 SLITRK1Q96PX8 696 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 TREX2Q9BQ50 279 aaPredicted RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 SH2D4AQ9H788 454 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 KAT14Q9H8E8 782 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 POLR1BQ9H9Y6 1135 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CLK4Q9HAZ1 481 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 GPR108Q9NPR9 543 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 DDX4Q9NQI0 724 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 HAUS2Q9NVX0 235 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CNOT8Q9UFF9 292 aaKnown RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 SLCO3A1Q9UIG8 710 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 FBXO9Q9UK97 447 aaPredicted RBP3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 RCOR1Q9UKL0 485 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 ERVK-11Q9UQG0 969 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 ADAM18Q9Y3Q7 739 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 CEPT1Q9Y6K0 416 aa3.61□□□□□ -1.83
AC055855.1-201ENST00000489563 TMEM202A6NGA9 273 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 PTGES3LE9PB15 166 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 SLC25A12O75746 678 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 NKX2-2O95096 273 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 VNN2O95498 520 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 GPTP24298 496 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 PGGT1BP53609 377 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 HSPA2P54652 639 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 PRAMEP78395 509 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 NIPAL4Q0D2K0 466 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 PDE1CQ14123 709 aaPredicted RBP3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 CRYMQ14894 314 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 SHBQ15464 509 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 C2orf68Q2NKX9 166 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 USP41Q3LFD5 358 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 MMEL1Q495T6 779 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 C6orf141Q5SZD1 244 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 FAM205BPQ63HN1 556 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 ZNF549Q6P9A3 640 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 KLHL35Q6PF15 583 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 QSOX2Q6ZRP7 698 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 CCDC129Q6ZRS4 1044 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 TTC39CQ8N584 583 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 AGBL3Q8NEM8 1001 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 NSMCE1Q8WV22 266 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 OIT3Q8WWZ8 545 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 HARBI1Q96MB7 349 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 NCAPGQ9BPX3 1015 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 TMEM47Q9BQJ4 181 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 DCLK3Q9C098 648 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 TMX4Q9H1E5 349 aaPredicted RBP3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 NDST4Q9H3R1 872 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 SMARCAD1Q9H4L7 1026 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 SYNCQ9H7C4 482 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 RANGRFQ9HD47 186 aaPredicted RBP3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 MTMR6Q9Y217 621 aa3.6□□□□□ -1.83
AC055855.1-201ENST00000489563 EIF4G1Q04637 1599 aaKnown RBP3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 RB1CC1Q8TDY2 1594 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 A0A1W2PQF6 199 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 A6NCN8 305 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 TIMM23O14925 209 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 GFPT2O94808 682 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 SOX30O94993 753 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 IGKV2-30P06310 120 aa3.59□□□□□ -1.83
AC055855.1-201ENST00000489563 CDH2P19022 906 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms