RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 ST3GAL2Q16842 350 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 INAVAQ3KP66 663 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 KCTD16Q68DU8 428 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 B4GALNT4Q76KP1 1039 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 DAAM2Q86T65 1068 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TSPAN33Q86UF1 283 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 PARGQ86W56 976 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 CCNYQ8ND76 341 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 EXD1Q8NHP7 514 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 PDCD6IPQ8WUM4 868 aaKnown RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TADA1Q96BN2 335 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 C1QTNF7Q9BXJ2 289 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TDRD1Q9BXT4 1180 aaKnown RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TCEAL2Q9H3H9 227 aaPredicted RBP14.25□□□□□ -0.13
COL9A2-208ENST00000488463 TRIM10Q9UDY6 481 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 PCDHA3Q9Y5H8 950 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 ACACAQ13085 2346 aa14.25□□□□□ -0.13
COL9A2-208ENST00000488463 LY6G6EA0A0G2JKS1 128 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 K7ESM1 405 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 CST8O60676 142 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ZRANB2O95218 330 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ALPIP09923 528 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ELFN1P0C7U0 828 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 CTNNA2P26232 953 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 TRIM23P36406 574 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 NR2C2P49116 596 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 DNAJC3Q13217 504 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 MTM1Q13496 603 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 GSE1Q14687 1217 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 PPP2R5EQ16537 467 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 TFDP3Q5H9I0 405 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 MACC1Q6ZN28 852 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 RCOR2Q8IZ40 523 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ZNF548Q8NEK5 533 aaPredicted RBP14.24□□□□□ -0.13
COL9A2-208ENST00000488463 OR4C6Q8NH72 309 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ALG3Q92685 438 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ZNF830Q96NB3 372 aaPredicted RBP14.24□□□□□ -0.13
COL9A2-208ENST00000488463 APOOQ9BUR5 198 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
COL9A2-208ENST00000488463 CEP41Q9BYV8 373 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 BRD8Q9H0E9 1235 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 DNAJC28Q9NX36 388 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 FTSJ1Q9UET6 329 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 KLK13Q9UKR3 277 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 U3KQA8 63 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 ZFYVE26Q68DK2 2539 aa14.24□□□□□ -0.13
COL9A2-208ENST00000488463 RP1P56715 2156 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 A0A0J9YYE9 177 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 ENC1O14682 589 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 SCAMP1O15126 338 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 SIGLEC6O43699 453 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 LZTS3O60299 673 aaPredicted RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 GCATO75600 419 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 LDOC1O95751 146 aaPredicted RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 TRBC1P01850 177 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 CTPS1P17812 591 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 TGM2P21980 687 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 HNF1BP35680 557 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 ACADVLP49748 655 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 HNRNPKP61978 463 aaKnown RBP eCLIP14.23□□□□□ -0.134e-6■■■■□ 20.5
COL9A2-208ENST00000488463 ITKQ08881 620 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 AP1B1Q10567 949 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 WASHC5Q12768 1159 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 ZNF211Q13398 564 aaPredicted RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 TFDP2Q14188 446 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 CDKN3Q16667 212 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 KAZNQ674X7 775 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 ESRP1Q6NXG1 681 aaKnown RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 CRTC1Q6UUV9 634 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 BBS12Q6ZW61 710 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 HSD11B1LQ7Z5J1 315 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 TECPR1Q7Z6L1 1165 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 RBFAQ8N0V3 343 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 GATA6Q92908 595 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 IMP4Q96G21 291 aaKnown RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 CNDP2Q96KP4 475 aaKnown RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 TRIB3Q96RU7 358 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 LYSMD1Q96S90 227 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 APOBEC2Q9Y235 224 aaKnown RBP14.23□□□□□ -0.13
COL9A2-208ENST00000488463 CHKBQ9Y259 395 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 NEUROG3Q9Y4Z2 214 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 OR1A2Q9Y585 309 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 NBEAQ8NFP9 2946 aa14.23□□□□□ -0.13
COL9A2-208ENST00000488463 PSMD11O00231 422 aa14.22□□□□□ -0.13
COL9A2-208ENST00000488463 PPP1R12AO14974 1030 aaPredicted RBP14.22□□□□□ -0.13
COL9A2-208ENST00000488463 NEBLO76041 1014 aa14.22□□□□□ -0.13
COL9A2-208ENST00000488463 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
COL9A2-208ENST00000488463 HOXC4P09017 264 aaPredicted RBP14.22□□□□□ -0.13
COL9A2-208ENST00000488463 JUNDP17535 347 aa14.22□□□□□ -0.13
COL9A2-208ENST00000488463 PTPN3P26045 913 aa14.22□□□□□ -0.13
COL9A2-208ENST00000488463 CD68P34810 354 aaPredicted RBP14.22□□□□□ -0.13
COL9A2-208ENST00000488463 PTPN7P35236 360 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms