RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 GRAPLQ8TC17 118 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-221ENST00000487739 PPM1EQ8WY54 764 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 ZNF570Q96NI8 536 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 TWNKQ96RR1 684 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 SIN3AQ96ST3 1273 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 PLEKHA5Q9HAU0 1116 aa3.92□□□□□ -1.78
CCDC66-221ENST00000487739 LILRA5A6NI73 299 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 KLK10O43240 276 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 AMBPP02760 352 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 RNF224P0DH78 156 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 HLA-DOBP13765 273 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 ETFAP13804 333 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 CD53P19397 219 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 PAPOLAP51003 745 aaKnown RBP3.91□□□□□ -1.78
CCDC66-221ENST00000487739 CLCNKAP51800 687 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 CHRNDQ07001 517 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 KRT72Q14CN4 511 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 FCN2Q15485 313 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 KCNT1Q5JUK3 1230 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 SERTAD4-AS1Q5TG53 156 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 C2CD5Q86YS7 1000 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 SAMD3Q8N6K7 520 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 RND1Q92730 232 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC66-221ENST00000487739 FBXL8Q96CD0 374 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 CDCA5Q96FF9 252 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 HAUS8Q9BT25 410 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 NUF2Q9BZD4 464 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 CSTL1Q9H114 145 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 ZNF696Q9H7X3 374 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 BABAM1Q9NWV8 329 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 TINAGQ9UJW2 476 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 AMDHD2Q9Y303 409 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 RIPOR2Q9Y4F9 1068 aa3.91□□□□□ -1.78
CCDC66-221ENST00000487739 SNED1Q8TER0 1413 aa3.9□□□□□ -1.78
CCDC66-221ENST00000487739 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 IRAK2O43187 625 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 TSPAN3O60637 253 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 PRSS1P07477 247 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 FGF5P12034 268 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 TAF6P49848 677 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 RAD23BP54727 409 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 PMP22Q01453 160 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 KRT71Q3SY84 523 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 LRRC8EQ6NSJ5 796 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 GFRALQ6UXV0 394 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 GPAT4Q86UL3 456 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 TMEM219Q86XT9 240 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 KMT5CQ86Y97 462 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 CHERPQ8IWX8 916 aaKnown RBP3.9□□□□□ -1.79
CCDC66-221ENST00000487739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCDC66-221ENST00000487739 ENAHQ8N8S7 591 aaPredicted RBP3.9□□□□□ -1.79
CCDC66-221ENST00000487739 BBS10Q8TAM1 723 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 STAMQ92783 540 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF501Q96CX3 271 aaPredicted RBP3.9□□□□□ -1.79
CCDC66-221ENST00000487739 COG8Q96MW5 612 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 RBM4Q9BWF3 364 aaKnown RBP3.9□□□□□ -1.79
CCDC66-221ENST00000487739 TAOK3Q9H2K8 898 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 IL1RAPL1Q9NZN1 696 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 RCOR1Q9UKL0 485 aa3.9□□□□□ -1.79
CCDC66-221ENST00000487739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCDC66-221ENST00000487739 GOLGA6L9A6NEM1 432 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 MMP2P08253 660 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 GNL1P36915 607 aaPredicted RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 LINC01547P58512 204 aaPredicted RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 VEPH1Q14D04 833 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 TAF11Q15544 211 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 TRNP1Q6NT89 227 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 RGMBQ6NW40 437 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 SLC36A4Q6YBV0 504 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 MTSS1LQ765P7 747 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 TAOK1Q7L7X3 1001 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 ADGRG6Q86SQ4 1221 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 NOXA1Q86UR1 476 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 HERC6Q8IVU3 1022 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 FOXRED2Q8IWF2 684 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 WDR63Q8IWG1 891 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 BEST2Q8NFU1 509 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 SLC20A1Q8WUM9 679 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF583Q96ND8 569 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 EYA3Q99504 573 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 BARHL1Q9BZE3 327 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 ESRP2Q9H6T0 727 aaKnown RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 DDX4Q9NQI0 724 aaKnown RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 SNTG1Q9NSN8 517 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 DDX43Q9NXZ2 648 aaKnown RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 KIAA1456Q9P272 454 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 PEMTQ9UBM1 199 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 CTNNAL1Q9UBT7 734 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 RALYQ9UKM9 306 aaKnown RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 STON1Q9Y6Q2 735 aa3.89□□□□□ -1.79
CCDC66-221ENST00000487739 PDS5AQ29RF7 1337 aaKnown RBP3.89□□□□□ -1.79
CCDC66-221ENST00000487739 ERI2A8K979 691 aaKnown RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 BCAT2O15382 392 aaPredicted RBP3.88□□□□□ -1.79
CCDC66-221ENST00000487739 EDN2P20800 178 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 AGAP20933 346 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 RRM1P23921 792 aa3.88□□□□□ -1.79
CCDC66-221ENST00000487739 POU1F1P28069 291 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms