RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 KCND1Q9NSA2 647 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 PCDHGB2Q9Y5G2 931 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 RGSL1A5PLK6 1076 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 NPIPB15A6NHN6 443 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ANKRD66B4E2M5 251 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 PDE2AO00408 941 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 WNT9AO14904 365 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 PMPCBO75439 489 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 RECQL5O94762 991 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 FGF1P05230 155 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ITGAVP06756 1048 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 KELP23276 732 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 HTR1BP28222 390 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 CD68P34810 354 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 THOP1P52888 689 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 FGL2Q14314 439 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 PUM1Q14671 1186 aaKnown RBP eCLIP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 CNGA3Q16281 694 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 PCSK7Q16549 785 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 CCNG2Q16589 344 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 LONRF2Q1L5Z9 754 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ZNF423Q2M1K9 1284 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 HLA-BQ31612 363 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ANKRD20A2Q5SQ80 823 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ANKRD20A1Q5TYW2 823 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ANKRD20A3Q5VUR7 823 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 GCNT7Q6ZNI0 430 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ZNF765Q7L2R6 523 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 PARGQ86W56 976 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 SLC35F6Q8N357 371 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 CCDC89Q8N998 374 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 NUS1Q96E22 293 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 TRIB3Q96RU7 358 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ELF4Q99607 663 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 KLF6Q99612 283 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 MYOCQ99972 504 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 MAGEE1Q9HCI5 957 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 FZD3Q9NPG1 666 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 HACD3Q9P035 362 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 TTC7AQ9ULT0 858 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-205ENST00000487150 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 SNX11Q9Y5W9 270 aa14.67□□□□□ -0.06
LIMS3-205ENST00000487150 C4orf47A7E2U8 309 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 H3BM21 787 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PGRMC1O00264 195 aaKnown RBP14.66□□□□□ -0.06
LIMS3-205ENST00000487150 CDX4O14627 284 aaPredicted RBP14.66□□□□□ -0.06
LIMS3-205ENST00000487150 ENC1O14682 589 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PSMD3O43242 534 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 GCATO75600 419 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PRLP01236 227 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PRKCGP05129 697 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PDHA1P08559 390 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 TSHRP16473 764 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 TEAD1P28347 426 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 HNF1BP35680 557 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 WNT3AP56704 352 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PFN3P60673 137 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 GNG11P61952 73 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 IRF4Q15306 451 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 QPCTQ16769 361 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PARP6Q2NL67 630 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 ZDHHC20Q5W0Z9 365 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 ESRP1Q6NXG1 681 aaKnown RBP14.66□□□□□ -0.06
LIMS3-205ENST00000487150 Q6ZSR6 202 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 NRSN1Q8IZ57 195 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 TP53I13Q8NBR0 393 aaPredicted RBP14.66□□□□□ -0.06
LIMS3-205ENST00000487150 OR13H1Q8NG92 308 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 SPATA22Q8NHS9 363 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 DTD2Q96FN9 168 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 COQ10AQ96MF6 247 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 NSMCE3Q96MG7 304 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 FAM118BQ9BPY3 351 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 TMEM121Q9BTD3 319 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 SLC32A1Q9H598 525 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 USP29Q9HBJ7 922 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 GPR27Q9NS67 375 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 PKD2L2Q9NZM6 624 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 SNX12Q9UMY4 172 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 SLCO1B1Q9Y6L6 691 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 SDK1Q7Z5N4 2213 aa14.66□□□□□ -0.06
LIMS3-205ENST00000487150 NUMA1Q14980 2115 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 TNRC6BQ9UPQ9 1833 aaKnown RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 ERI2A8K979 691 aaKnown RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 CACNB4O00305 520 aaPredicted RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 RAD51BO15315 384 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 FLRT2O43155 660 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 PCDHGA12O60330 932 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 MT-CYBP00156 380 aaPredicted RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 WNT1P04628 370 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 CTPS1P17812 591 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 LHCGRP22888 699 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 IGFALSP35858 605 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 RXRGP48443 463 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms