RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 VEGFAP15692 232 aaPredicted RBP4.17□□□□□ -1.74
SMC4-215ENST00000484799 POU1F1P28069 291 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 CHATP28329 748 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 MAN1A1P33908 653 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 CASP2P42575 452 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 FMO5P49326 533 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 CLCN3P51790 818 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 ZBTB17Q13105 803 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 TAF11Q15544 211 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 OASLQ15646 514 aaKnown RBP4.17□□□□□ -1.74
SMC4-215ENST00000484799 CCDC6Q16204 474 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 INTS11Q5TA45 600 aaKnown RBP4.17□□□□□ -1.74
SMC4-215ENST00000484799 WDR78Q5VTH9 848 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 ZNF771Q7L3S4 317 aaPredicted RBP4.17□□□□□ -1.74
SMC4-215ENST00000484799 FAM160B2Q86V87 743 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 SUGP1Q8IWZ8 645 aaKnown RBP4.17□□□□□ -1.74
SMC4-215ENST00000484799 ZNF441Q8N8Z8 693 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 TNIP2Q8NFZ5 429 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 SPPL3Q8TCT6 385 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 ERGIC1Q969X5 290 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 UBXN10Q96LJ8 280 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 DOCK7Q96N67 2140 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 UNC45AQ9H3U1 944 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 NOX4Q9NPH5 578 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 SWAP70Q9UH65 585 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 FEM1BQ9UK73 627 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 TCF19Q9Y242 345 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 NPIPB11E5RHQ5 1161 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 P2RY10O00398 339 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 SOCS6O14544 535 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 DVL1O14640 695 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 EPB41L2O43491 1005 aaKnown RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 GUCY1B2O75343 617 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 CAVIN2O95810 425 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 HNRNPH1P31943 449 aaKnown RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 RYKP34925 604 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 DVL1P1P54792 670 aaPredicted RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 DDX10Q13206 875 aaKnown RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 CTF1Q16619 201 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 KRTAP24-1Q3LI83 254 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 PPP6R3Q5H9R7 873 aaPredicted RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 FBXO47Q5MNV8 452 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 CLEC4GQ6UXB4 293 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 B3GNT6Q6ZMB0 384 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 MEX3BQ6ZN04 569 aaKnown RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 TADA2BQ86TJ2 420 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 AGBL3Q8NEM8 1001 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 PPHLN1Q8NEY8 458 aaKnown RBP4.16□□□□□ -1.74
SMC4-215ENST00000484799 EBF2Q9HAK2 575 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 C17orf75Q9HAS0 396 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 BPIFA1Q9NP55 256 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 RASSF1Q9NS23 344 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 ABCF3Q9NUQ8 709 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 RRN3Q9NYV6 651 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 PEMTQ9UBM1 199 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 FAM96BQ9Y3D0 163 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 NFE2L3Q9Y4A8 694 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 A3GALT2U3KPV4 340 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 ADGRF5Q8IZF2 1346 aa4.16□□□□□ -1.74
SMC4-215ENST00000484799 CPED1A4D0V7 1026 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 VWA3AA6NCI4 1184 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 PABPN1LA6NDY0 278 aaKnown RBP4.15□□□□□ -1.75
SMC4-215ENST00000484799 HSPB2A8KAH6 182 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 LINC00271P0C7V0 271 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 RRM1P23921 792 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 TMPOP42166 694 aaKnown RBP4.15□□□□□ -1.75
SMC4-215ENST00000484799 GPD2P43304 727 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 CHRNDQ07001 517 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 LMOD3Q0VAK6 560 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 HSPB2Q16082 182 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 GRAPLQ8TC17 118 aaPredicted RBP4.15□□□□□ -1.75
SMC4-215ENST00000484799 RILPL2Q969X0 211 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 SKA1Q96BD8 255 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 FBXL8Q96CD0 374 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 BBS4Q96RK4 519 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 MXRA8Q9BRK3 442 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 LRRC4Q9HBW1 653 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 ZNF334Q9HCZ1 680 aaPredicted RBP4.15□□□□□ -1.75
SMC4-215ENST00000484799 CNGB3Q9NQW8 809 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 SLC13A4Q9UKG4 626 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMC4-215ENST00000484799 TMEM98Q9Y2Y6 226 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 CGNL1Q0VF96 1302 aa4.15□□□□□ -1.75
SMC4-215ENST00000484799 A0A1W2PS18 150 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 B9A039 149 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 EIF3FO00303 357 aaPredicted RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 CAPN9O14815 690 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 NDUFS7O75251 213 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 RFPL2O75678 378 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 AGR2O95994 175 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 HSP90AA1P07900 732 aaKnown RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 RNF224P0DH78 156 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 IRF1P10914 325 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 ETFAP13804 333 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 GM2AP17900 193 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 PGM1P36871 562 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 RBM39Q14498 530 aaKnown RBP4.14□□□□□ -1.75
SMC4-215ENST00000484799 PPP2R5BQ15173 497 aa4.14□□□□□ -1.75
SMC4-215ENST00000484799 NFIL3Q16649 462 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms