RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 KCNC4Q03721 635 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 INPP5AQ14642 412 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 LCN8Q6JVE9 175 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 OSTM1Q86WC4 334 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 DDIASQ8IXT1 998 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 DHRSXQ8N5I4 330 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 PCYOX1LQ8NBM8 494 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 TBL1YQ9BQ87 522 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 CD320Q9NPF0 282 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 TRNAU1APQ9NX07 287 aaKnown RBP19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 FBXW11Q9UKB1 542 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 ZSWIM8A7E2V4 1837 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 TTC24A2A3L6 582 aaPredicted RBP19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 ARPC2O15144 300 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 CLASP2O75122 1294 aaKnown RBP19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 HSD17B1P14061 328 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 SLC6A2P23975 617 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 TKTL1P51854 596 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 GRSF1Q12849 480 aaKnown RBP eCLIP19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 ZNF484Q5JVG2 852 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 FBXO47Q5MNV8 452 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 LINC00523Q86TU6 105 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 AFAP1L2Q8N4X5 818 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 TRPV3Q8NET8 790 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 BEST2Q8NFU1 509 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 ZFYVE28Q9HCC9 887 aa19.81■□□□□ 0.76
RPUSD3-216ENST00000484134 YJEFN3A6XGL0 299 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 PPP6CO00743 305 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 MT-ND1P03886 318 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SOX11P35716 441 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 HCAR3P49019 387 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 APLP1P51693 650 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SLC12A2P55011 1212 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 POU4F1Q01851 419 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SCAPQ12770 1279 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 NR1D2Q14995 579 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 EGFLAMQ63HQ2 1017 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 TBPL2Q6SJ96 375 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 USP51Q70EK9 711 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 KDELC2Q7Z4H8 507 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 OR13F1Q8NGS4 319 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 NTAN1Q96AB6 310 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 VAT1Q99536 393 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 MTG1Q9BT17 334 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 FICDQ9BVA6 458 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 PLEKHA5Q9HAU0 1116 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 ACTR3BQ9P1U1 418 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 FNDC1Q4ZHG4 1894 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 GFAPP14136 432 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 CHRNA4P43681 627 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 CYP2A13Q16696 494 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 KIF19Q2TAC6 998 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SULF1Q8IWU6 871 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 COLGALT2Q8IYK4 626 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 MAGEE2Q8TD90 523 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SH3RF2Q8TEC5 729 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 DCPSQ96C86 337 aaKnown RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 C19orf60Q96EN9 201 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SLC9A7Q96T83 725 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 BRD8Q9H0E9 1235 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 ATXN3LQ9H3M9 355 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 GOLGA2P5Q9HBQ8 144 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 SMPD3Q9NY59 655 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 IFT80Q9P2H3 777 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 DERAQ9Y315 318 aa19.8■□□□□ 0.76
RPUSD3-216ENST00000484134 PIRO00625 290 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 DYNC1LI2O43237 492 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 CACNG3O60359 315 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 GMPSP49915 693 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 ATP4BP51164 291 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 GRB7Q14451 532 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 TMTC4Q5T4D3 741 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 GALNT18Q6P9A2 607 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 KLHDC8BQ8IXV7 354 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 ANKRD13AQ8IZ07 590 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 MINDY1Q8N5J2 469 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 B3GALNT2Q8NCR0 500 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 ABHD8Q96I13 439 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 CSF3RQ99062 836 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 HOPXQ9BPY8 73 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 GNPTGQ9UJJ9 305 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 H0Y858 1186 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 INPP4BO15327 924 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 KCNH1O95259 989 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 CCNA2P20248 432 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 BDNFP23560 247 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 AKAP5P24588 427 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 HLCSP50747 726 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 CDH13P55290 713 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 STX1BP61266 288 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 CYP51A1Q16850 503 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 INTS6LQ5JSJ4 861 aaKnown RBP19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 HNRNPABQ99729 332 aaKnown RBP19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 NANOGQ9H9S0 305 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 FANCEQ9HB96 536 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 TLR9Q9NR96 1032 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 TREX1Q9NSU2 369 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 ANKRD12Q6UB98 2062 aa19.79■□□□□ 0.76
RPUSD3-216ENST00000484134 NRCAMQ92823 1304 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms