RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PCDH15Q96QU1 1955 aa7□□□□□ -1.29
BRCA1-216ENST00000484087 SPTBN2O15020 2390 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 A0A0D9SEW6 157 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TCRBV9S1A1TA0A576 114 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TYW5A2RUC4 315 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 GMNCA6NCL1 334 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 ARHGAP42A6NI28 874 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 WASH4PA8MWX3 477 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 K7ERQ8 282 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 BNIP3LO60238 219 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 SIN3BO75182 1162 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 BANF1O75531 89 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 ALDH1A2O94788 518 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 CHN1P15882 459 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 POLR2EP19388 210 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 PSMB4P28070 264 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 NDST2P52849 883 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 RPL6Q02878 288 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 ENPP2Q13822 863 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 RSPO4Q2I0M5 234 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 USP39Q53GS9 565 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 MANEALQ5VSG8 457 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 NAPEPLDQ6IQ20 393 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 SDE2Q6IQ49 451 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 LAYNQ6UX15 382 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 LINGO4Q6UY18 593 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 PRR23CQ6ZRP0 262 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TRMT11Q7Z4G4 463 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 KIAA0907Q7Z7F0 614 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TAX1BP1Q86VP1 789 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 CAND1Q86VP6 1230 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 LRRC6Q86X45 466 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF354CQ86Y25 554 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TMPRSS6Q8IU80 811 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 CTAGE3PQ8IX95 158 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 NPWQ8N729 165 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 DNAAF3Q8N9W5 541 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 OR7D4Q8NG98 312 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 FIBINQ8TAL6 211 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 GSDMBQ8TAX9 411 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 PIGKQ92643 395 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 ALKBH8Q96BT7 664 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 MRRFQ96E11 262 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 STAMBPL1Q96FJ0 436 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 SGSM3Q96HU1 749 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 AGAP3Q96P47 875 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 NSRP1Q9H0G5 558 aaKnown RBP6.99□□□□□ -1.29
BRCA1-216ENST00000484087 GBA3Q9H227 469 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TMEM245Q9H330 911 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 TRABDQ9H4I3 376 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 RETREG1Q9H6L5 497 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 LRRC40Q9H9A6 602 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 CTNNAL1Q9UBT7 734 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 NEU3Q9UQ49 428 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 SHROOM3Q8TF72 1996 aa6.99□□□□□ -1.29
BRCA1-216ENST00000484087 CCDC163A0A0D9SF12 145 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 A0A1B0GVM2 712 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TMEM120BA0PK00 339 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MAGEB16A2A368 324 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TCAF2A6NFQ2 919 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 FAM47DPA6NHR8 397 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CFAP99D6REC4 459 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 EBAG9O00559 213 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MATN3O15232 486 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZBTB24O43167 697 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SYNCRIPO60506 623 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 AVILO75366 819 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 KRT37O76014 449 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 KRT38O76015 456 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ANXA9O76027 345 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 AP2A1O95782 977 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MT-CO1P00395 513 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 JCHAINP01591 159 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MT-ND3P03897 115 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 POLBP06746 335 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RETP07949 1114 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 DLDP09622 509 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CCNB1P14635 433 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PGAM1P18669 254 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CNTFP26441 200 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ACSL1P33121 698 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CNR2P34972 360 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MAGEA3P43357 314 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 NPY2RP49146 381 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SERPINB9P50453 376 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RENBPP51606 427 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SLC18A1P54219 525 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SESN2P58004 480 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 IL9RQ01113 521 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MTM1Q13496 603 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 NAB1Q13506 487 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 STARD3Q14849 445 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 EIF4HQ15056 248 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PREPLQ4J6C6 727 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RABGAP1LQ5R372 815 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RNF219Q5W0B1 726 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 Q6ZVU0 165 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MICALCLQ6ZW33 695 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CYS1Q717R9 158 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms