RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 EXOC8Q8IYI6 725 aa4.19□□□□□ -1.74
COMMD3-213ENST00000483684 FBXL8Q96CD0 374 aa4.19□□□□□ -1.74
COMMD3-213ENST00000483684 KIF1BPQ96EK5 621 aa4.19□□□□□ -1.74
COMMD3-213ENST00000483684 OR1F2PQ96R84 312 aa4.19□□□□□ -1.74
COMMD3-213ENST00000483684 SLCO3A1Q9UIG8 710 aa4.19□□□□□ -1.74
COMMD3-213ENST00000483684 LRRFIP2Q9Y608 721 aaKnown RBP4.19□□□□□ -1.74
COMMD3-213ENST00000483684 NDUFS7O75251 213 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 SERPINB2P05120 415 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 COX7A2P14406 83 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 AGAP20933 346 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 GPTP24298 496 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 HNRNPH1P31943 449 aaKnown RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 GLIPR1P48060 266 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 KRTAP10-3P60369 221 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 NEDD9Q14511 834 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 PPP2R5BQ15173 497 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 CALCRLQ16602 461 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 HIST2H2ACQ16777 129 aaPredicted RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 AMZ1Q400G9 498 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 SGO1Q5FBB7 561 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 PAPPA-AS1Q5QFB9 102 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 TXNDC8Q6A555 127 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 FBXO46Q6PJ61 603 aaPredicted RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 CPLX2Q6PUV4 134 aaKnown RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 ZNF771Q7L3S4 317 aaPredicted RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 SLC35F3Q8IY50 421 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 SMAP1Q8IYB5 467 aaPredicted RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 ZCCHC9Q8N567 271 aaKnown RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 CREB3L4Q8TEY5 395 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 KLHL15Q96M94 604 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 ZNF570Q96NI8 536 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 MAGEE1Q9HCI5 957 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 DONSONQ9NYP3 566 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 FAM96BQ9Y3D0 163 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 LSM4Q9Y4Z0 139 aaKnown RBP4.18□□□□□ -1.74
COMMD3-213ENST00000483684 SNED1Q8TER0 1413 aa4.18□□□□□ -1.74
COMMD3-213ENST00000483684 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 TSPAN4O14817 238 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GAGE7O76087 117 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 KDM4BO94953 1096 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 CLDN14O95500 239 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 PAK4O96013 591 aaPredicted RBP4.17□□□□□ -1.74
COMMD3-213ENST00000483684 MT-CYBP00156 380 aaPredicted RBP4.17□□□□□ -1.74
COMMD3-213ENST00000483684 TFP02787 698 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GAGE12FP0CL80 117 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GAGE12GP0CL81 117 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GAGE12IP0CL82 117 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 CD58P19256 250 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 STX2P32856 288 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GAGE1Q13065 139 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GAGE4Q13068 117 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 RNPS1Q15287 305 aaKnown RBP4.17□□□□□ -1.74
COMMD3-213ENST00000483684 TCTN1Q2MV58 587 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 TMEM95Q3KNT9 176 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 SLC9B1Q4ZJI4 515 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 SLC9C2Q5TAH2 1124 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 ANKRD54Q6NXT1 300 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 SCCPDHQ8NBX0 429 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 AGBL3Q8NEM8 1001 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 RNF125Q96EQ8 232 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 BICD1Q96G01 975 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 C3orf30Q96M34 536 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 C1QTNF5Q9BXJ0 243 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 GLIS2Q9BZE0 524 aaPredicted RBP4.17□□□□□ -1.74
COMMD3-213ENST00000483684 ESRP2Q9H6T0 727 aaKnown RBP4.17□□□□□ -1.74
COMMD3-213ENST00000483684 BPIFA1Q9NP55 256 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 PPP1R14DQ9NXH3 145 aa4.17□□□□□ -1.74
COMMD3-213ENST00000483684 MAGEA13PA6NCF6 341 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 SOCS6O14544 535 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 CLGNO14967 610 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 LDLRAD4O15165 306 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 PMS2P2O95744 297 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 MMP2P08253 660 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 SHMT1P34896 483 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 EIF2S3P41091 472 aaKnown RBP4.16□□□□□ -1.74
COMMD3-213ENST00000483684 TAF6P49848 677 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 TUBP50607 506 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 BRWD1-AS2P59051 145 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 BAK1Q16611 211 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 PPP6R3Q5H9R7 873 aaPredicted RBP4.16□□□□□ -1.74
COMMD3-213ENST00000483684 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 LCTLQ6UWM7 567 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 MTSS1LQ765P7 747 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 HEATR4Q86WZ0 1026 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 ESX1Q8N693 406 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 BEST2Q8NFU1 509 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 SPATA20Q8TB22 786 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 RND1Q92730 232 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 KLHL29Q96CT2 875 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 IL17FQ96PD4 163 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 TKTL2Q9H0I9 626 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 VEZTQ9HBM0 779 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 MKKSQ9NPJ1 570 aaPredicted RBP4.16□□□□□ -1.74
COMMD3-213ENST00000483684 SMARCAL1Q9NZC9 954 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 MPP6Q9NZW5 540 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 RCOR1Q9UKL0 485 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 A4GNTQ9UNA3 340 aa4.16□□□□□ -1.74
COMMD3-213ENST00000483684 ATXN2Q99700 1313 aaKnown RBP4.16□□□□□ -1.74
COMMD3-213ENST00000483684 CCDC196A0A1B0GTZ2 297 aa4.15□□□□□ -1.75
COMMD3-213ENST00000483684 ERI2A8K979 691 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms