RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 LYSMD1Q96S90 227 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 HEMGNQ9BXL5 484 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 SLC25A51Q9H1U9 297 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 KCTD5Q9NXV2 234 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 BTBD3Q9Y2F9 522 aa18.06■□□□□ 0.48
HDAC6-225ENST00000483506 A0A0J9YYE9 177 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 RECQL5O94762 991 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-225ENST00000483506 FTCDO95954 541 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 TRBC1P01850 177 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 CCDC175P0C221 793 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 CETN2P41208 172 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 CD86P42081 329 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 TPRG1LQ5T0D9 272 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 N4BP2L1Q5TBK1 243 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-225ENST00000483506 PARGQ86W56 976 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 NDUFAF2Q8N183 169 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 SETD7Q8WTS6 366 aaKnown RBP18.05■□□□□ 0.48
HDAC6-225ENST00000483506 AGAP3Q96P47 875 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 VAT1Q99536 393 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 CDC6Q99741 560 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 CEP41Q9BYV8 373 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 PCDH9Q9HC56 1237 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 DNPEPQ9ULA0 475 aa18.05■□□□□ 0.48
HDAC6-225ENST00000483506 CAPN8A6NHC0 703 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 NRDCO43847 1150 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 TJP3O95049 919 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 CSF2P04141 144 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 NME1P15531 152 aaKnown RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 MTM1Q13496 603 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 PDE1CQ14123 709 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 PTK2BQ14289 1009 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 TRIP6Q15654 476 aaKnown RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 KDM7AQ6ZMT4 941 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 MACC1Q6ZN28 852 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 B4GALNT4Q76KP1 1039 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 ZC3H18Q86VM9 953 aaKnown RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 GATAD2AQ86YP4 633 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 RAVER1Q8IY67 606 aaKnown RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 ACTL9Q8TC94 416 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 RHBDD1Q8TEB9 315 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 HTR3CQ8WXA8 447 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 HAUS1Q96CS2 278 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 TRIB3Q96RU7 358 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 GLOD4Q9HC38 313 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 GUCA1BQ9UMX6 200 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 PACSIN2Q9UNF0 486 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-225ENST00000483506 CHKBQ9Y259 395 aa18.04■□□□□ 0.48
HDAC6-225ENST00000483506 ITGAVP06756 1048 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 HOXC4P09017 264 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 ALPIP09923 528 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 ZNF30P17039 623 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 PMLP29590 882 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 CD68P34810 354 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 HNF1BP35680 557 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 TRIM23P36406 574 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 SIM1P81133 766 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 OTUD4Q01804 1114 aaKnown RBP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 BNIP3Q12983 259 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 KLF1Q13351 362 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 AADACL2Q6P093 401 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 TSPAN33Q86UF1 283 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 DTD2Q96FN9 168 aa18.03■□□□□ 0.48
HDAC6-225ENST00000483506 RBM15Q96T37 977 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC6-225ENST00000483506 LRP4O75096 1905 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 SPAARA0A1B0GVQ0 90 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 A8MX80 341 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 ANKRD66B4E2M5 251 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 ZNF189O75820 626 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-225ENST00000483506 PIAS2O75928 621 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 DKK1O94907 266 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 CTPS1P17812 591 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 KCNA4P22459 653 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 DGKAP23743 735 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 TEAD1P28347 426 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 THOP1P52888 689 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 EPHB1P54762 984 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 HNRNPKP61978 463 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC6-225ENST00000483506 EIF2B5Q13144 721 aaKnown RBP18.02■□□□□ 0.48
HDAC6-225ENST00000483506 ARHGEF7Q14155 803 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 INPP5AQ14642 412 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 NFATC4Q14934 902 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 ACOX1Q15067 660 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 PTPRRQ15256 657 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 QPCTQ16769 361 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 CCDC181Q5TID7 509 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 CRTC1Q6UUV9 634 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 HSD11B1LQ7Z5J1 315 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 TECPR1Q7Z6L1 1165 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 NUS1Q96E22 293 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 TBATAQ96M53 351 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 ADGRE3Q9BY15 652 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 KLF15Q9UIH9 416 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 TRHDEQ9UKU6 1024 aa18.02■□□□□ 0.48
HDAC6-225ENST00000483506 TNFSF14O43557 240 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 STC1P52823 247 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 KIAA1024LP59773 190 aa18.01■□□□□ 0.47
HDAC6-225ENST00000483506 PTSQ03393 145 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms