RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 TEKT5Q96M29 485 aa18.44■□□□□ 0.54
SMIM4-204ENST00000482728 TDRD1Q9BXT4 1180 aaKnown RBP18.44■□□□□ 0.54
SMIM4-204ENST00000482728 ADGRE3Q9BY15 652 aa18.44■□□□□ 0.54
SMIM4-204ENST00000482728 KCTD5Q9NXV2 234 aa18.44■□□□□ 0.54
SMIM4-204ENST00000482728 PCOLCE2Q9UKZ9 415 aa18.44■□□□□ 0.54
SMIM4-204ENST00000482728 PACSIN2Q9UNF0 486 aaPredicted RBP18.44■□□□□ 0.54
SMIM4-204ENST00000482728 RPL26L1Q9UNX3 145 aaKnown RBP18.44■□□□□ 0.54
SMIM4-204ENST00000482728 PPIL1Q9Y3C6 166 aa18.44■□□□□ 0.54
SMIM4-204ENST00000482728 CAPN6Q9Y6Q1 641 aa18.44■□□□□ 0.54
SMIM4-204ENST00000482728 TDRD6O60522 2096 aaKnown RBP18.44■□□□□ 0.54
SMIM4-204ENST00000482728 SPTY2D1-AS1A0A0U1RR47 76 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 SPAARA0A1B0GVQ0 90 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 MED19A0JLT2 244 aaPredicted RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 GOLGA6L9A6NEM1 432 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 FZD6O60353 706 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 HEXIM1O94992 359 aaKnown RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 PTPN3P26045 913 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 HNF1BP35680 557 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 SKOR1P84550 965 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 CCZ1BP86790 482 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 CCZ1P86791 482 aaPredicted RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 ZNF211Q13398 564 aaPredicted RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 FZD2Q14332 565 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 IHHQ14623 411 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 INPP5AQ14642 412 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 CNGA3Q16281 694 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 ZNF542PQ5EBM4 170 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 ACTL9Q8TC94 416 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 HTR3CQ8WXA8 447 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 IMP4Q96G21 291 aaKnown RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 MCCC1Q96RQ3 725 aaPredicted RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 RBM15Q96T37 977 aaKnown RBP eCLIP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 VAT1Q99536 393 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 GLOD4Q9HC38 313 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 LZTFL1Q9NQ48 299 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 KLHL8Q9P2G9 620 aaPredicted RBP18.43■□□□□ 0.54
SMIM4-204ENST00000482728 BTBD3Q9Y2F9 522 aa18.43■□□□□ 0.54
SMIM4-204ENST00000482728 TP53BP1Q12888 1972 aaPredicted RBP18.42■□□□□ 0.54
SMIM4-204ENST00000482728 DNAH14Q0VDD8 3507 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 A0A0J9YYE9 177 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 NPIPB15A6NHN6 443 aaPredicted RBP18.42■□□□□ 0.54
SMIM4-204ENST00000482728 SDC3O75056 442 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 CBFA2T3O75081 653 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 TRBC1P01850 177 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 PCCBP05166 539 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 MMP2P08253 660 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 ALPIP09923 528 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 EIF3EP60228 445 aaKnown RBP18.42■□□□□ 0.54
SMIM4-204ENST00000482728 HNRNPKP61978 463 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMIM4-204ENST00000482728 OTUD4Q01804 1114 aaKnown RBP18.42■□□□□ 0.54
SMIM4-204ENST00000482728 FAM182AQ5T1J6 154 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 AADACL2Q6P093 401 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 KDM7AQ6ZMT4 941 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 PID1Q7Z2X4 250 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 PARGQ86W56 976 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 LPCAT1Q8NF37 534 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 HES6Q96HZ4 224 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 QKIQ96PU8 341 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMIM4-204ENST00000482728 ALS2CR12Q96Q35 445 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 GPR27Q9NS67 375 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 DNPEPQ9ULA0 475 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 LRRK1Q38SD2 2015 aa18.42■□□□□ 0.54
SMIM4-204ENST00000482728 GOLGA4Q13439 2230 aaKnown RBP18.41■□□□□ 0.54
SMIM4-204ENST00000482728 ANKRD66B4E2M5 251 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 H3BM21 787 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 PSMD11O00231 422 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 DDX3YO15523 660 aaKnown RBP18.41■□□□□ 0.54
SMIM4-204ENST00000482728 PRLP01236 227 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 ADRB1P08588 477 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 HTR1BP28222 390 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 TNNT3P45378 269 aaPredicted RBP18.41■□□□□ 0.54
SMIM4-204ENST00000482728 WASHC5Q12768 1159 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 MTM1Q13496 603 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 NOMO1Q15155 1222 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 PTPRRQ15256 657 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 HS1BP3Q53T59 392 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 DARS2Q6PI48 645 aaKnown RBP18.41■□□□□ 0.54
SMIM4-204ENST00000482728 ZNF662Q6ZS27 426 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 KDELC2Q7Z4H8 507 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 TSPAN33Q86UF1 283 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 CDKL3Q8IVW4 592 aaPredicted RBP18.41■□□□□ 0.54
SMIM4-204ENST00000482728 EID2Q8N6I1 236 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 COQ10AQ96MF6 247 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 HERPUD2Q9BSE4 406 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 APOOQ9BUR5 198 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 MLPHQ9BV36 600 aaPredicted RBP18.41■□□□□ 0.54
SMIM4-204ENST00000482728 TRHDEQ9UKU6 1024 aa18.41■□□□□ 0.54
SMIM4-204ENST00000482728 ARID1BQ8NFD5 2236 aaPredicted RBP18.4■□□□□ 0.54
SMIM4-204ENST00000482728 NEMP2A6NFY4 417 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 STK10O94804 968 aaKnown RBP18.4■□□□□ 0.54
SMIM4-204ENST00000482728 CSF2P04141 144 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 RBP3P10745 1247 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 JUNDP17535 347 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 PCSK7Q16549 785 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 FAXCQ5TGI0 409 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 LRRC66Q68CR7 880 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 CRTC1Q6UUV9 634 aa18.4■□□□□ 0.54
SMIM4-204ENST00000482728 Q6ZVL8 140 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms