RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PRKAA2P54646 552 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 FOLH1Q04609 750 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 INPP5AQ14642 412 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 PDK3Q15120 406 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 TBCELQ5QJ74 424 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 OTUD3Q5T2D3 398 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 STEAP4Q687X5 459 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 PAOXQ6QHF9 649 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 PQLC1Q8N2U9 271 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 METTL6Q8TCB7 284 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 SEPT8Q92599 483 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 VPS50Q96JG6 964 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 THUMPD3Q9BV44 507 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 ING2Q9H160 280 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 OSBPL2Q9H1P3 480 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 FBRSL1Q9HCM7 1045 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 ZNF487B1APH4 448 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 SYNCRIPO60506 623 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 SNNO75324 88 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 SH3BGRLO75368 114 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 MT-ND1P03886 318 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 LYNP07948 512 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 PSMC3P17980 439 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 DDX39BQ13838 428 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 VPS26BQ4G0F5 336 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 RNF219Q5W0B1 726 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 DHFR2Q86XF0 187 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 CATSPER1Q8NEC5 780 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 UROC1Q96N76 676 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 KATNBL1Q9H079 304 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 GID8Q9NWU2 228 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 CHCHD3Q9NX63 227 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 WWOXQ9NZC7 414 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 BAG5Q9UL15 447 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 FAF1Q9UNN5 650 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 LRRC42Q9Y546 428 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 ACTL7AQ9Y615 435 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 GON4LQ3T8J9 2241 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 CCNT2O60583 730 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 DNAJA2O60884 412 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 ALDH1A2O94788 518 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 SLC35E2BP0CK96 405 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 EEF1DP29692 281 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 RECQLP46063 649 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 PPP1R3AQ16821 1122 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 MIER2Q8N344 545 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 TXNDC5Q8NBS9 432 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 RDH11Q8TC12 318 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 EZH1Q92800 747 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 ABTB1Q969K4 478 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 SUSD3Q96L08 255 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 CCDC138Q96M89 665 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 SGIP1Q9BQI5 828 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 SLC25A23Q9BV35 468 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 CLPBQ9H078 707 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 OLA1Q9NTK5 396 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 DDX18Q9NVP1 670 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 LMCD1Q9NZU5 365 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 AP4S1Q9Y587 144 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 KIAA0100Q14667 2235 aaKnown RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 SF3B1O75533 1304 aaKnown RBP eCLIP9.16□□□□□ -0.94
CALD1-220ENST00000482470 CCDC162PA2VCL2 907 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 FFAR3O14843 346 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 GPR42O15529 346 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 MAFKO60675 156 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 VCLP18206 1134 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 TACR2P21452 398 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 USP46P62068 366 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 ARHGEF7Q14155 803 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 LRRC23Q53EV4 343 aaPredicted RBP9.16□□□□□ -0.94
CALD1-220ENST00000482470 HECTD3Q5T447 861 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 METTL21CQ5VZV1 264 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 EPGNQ6UW88 154 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 SHKBP1Q8TBC3 707 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 KCNN1Q92952 543 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 MTFMTQ96DP5 389 aaKnown RBP9.16□□□□□ -0.94
CALD1-220ENST00000482470 SCLYQ96I15 445 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 ADGRE3Q9BY15 652 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 CCDC90BQ9GZT6 254 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 COPG1Q9Y678 874 aaKnown RBP9.16□□□□□ -0.94
CALD1-220ENST00000482470 A0A088AWK7 358 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 A0A0D9SEW6 157 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 A0A0U1RQS6 177 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 FAM149AA5PLN7 773 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 H7C4K7 107 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 MAGEA6P43360 314 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 FRG1Q14331 258 aaKnown RBP9.16□□□□□ -0.94
CALD1-220ENST00000482470 TBC1D25Q3MII6 688 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 MS4A13Q5J8X5 152 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 TMTC4Q5T4D3 741 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 FAM45BPQ6NSW5 357 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 SERINC5Q86VE9 423 aa9.16□□□□□ -0.94
CALD1-220ENST00000482470 CLEC4FQ8N1N0 589 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms