RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ALPIP09923 528 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ZNF30P17039 623 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 CTPS1P17812 591 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ENGP17813 658 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ACTN2P35609 894 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 HNF1BP35680 557 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ATXN3P54252 364 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 GEMP55040 296 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 C21orf59P57076 290 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 SEMG2Q02383 582 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 GRIK2Q13002 908 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 FGL2Q14314 439 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 PCSK7Q16549 785 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 PARP6Q2NL67 630 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 P3H1Q32P28 736 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 HS1BP3Q53T59 392 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 KDELC1Q6UW63 502 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ARHGEF18Q6ZSZ5 1173 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 RAVER1Q8IY67 606 aaKnown RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 CCDC110Q8TBZ0 833 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ACTRT1Q8TDG2 376 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 CENPTQ96BT3 561 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 LRRC45Q96CN5 670 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 OXNAD1Q96HP4 312 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 SRPK1Q96SB4 655 aaKnown RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 KLF6Q99612 283 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 NAPGQ99747 312 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-219ENST00000479941 EDEM2Q9BV94 578 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 FZD3Q9NPG1 666 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 UBP1Q9NZI7 540 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 ANKRD6Q9Y2G4 727 aa10.86□□□□□ -0.67
ATG4B-219ENST00000479941 SPTBN4Q9H254 2564 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GOLGA6CA6NDK9 693 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GOLGA6BA6NDN3 693 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 A6NNZ2 444 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 A8MX80 341 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 TOR1BO14657 336 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 RECQL5O94762 991 aaPredicted RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 NDST3O95803 873 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 WNT1P04628 370 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GOLGA6DP0CG33 693 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 HLA-DPA1P20036 260 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 LHCGRP22888 699 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 PSMB4P28070 264 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GDF10P55107 478 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 WNT3AP56704 352 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 NXPH1P58417 271 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 SNX1Q13596 522 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GALNT3Q14435 633 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 LRRC14Q15048 493 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 ACOX1Q15067 660 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 CNGA3Q16281 694 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 QPCTQ16769 361 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 KIF19Q2TAC6 998 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 PAPD7Q5XG87 772 aaKnown RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 CRTC1Q6UUV9 634 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 KYAT3Q6YP21 454 aaKnown RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GCNT7Q6ZNI0 430 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 KDELC2Q7Z4H8 507 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 ABI3BPQ7Z7G0 1075 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 DCP2Q8IU60 420 aaKnown RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 CBARPQ8N350 705 aaPredicted RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 TP53I13Q8NBR0 393 aaPredicted RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 KLHDC7BQ96G42 594 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 MRGPRX2Q96LB1 330 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 BMFQ96LC9 184 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 WDR24Q96S15 920 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 MYOCQ99972 504 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GTPBP2Q9BX10 602 aaKnown RBP10.85□□□□□ -0.67
ATG4B-219ENST00000479941 FSD1LQ9BXM9 530 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 TMEM9BQ9NQ34 198 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 GOLGA6AQ9NYA3 693 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 CA5BQ9Y2D0 317 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 COQ6Q9Y2Z9 468 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 PLXNA2O75051 1894 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 DOCK9Q9BZ29 2069 aa10.85□□□□□ -0.67
ATG4B-219ENST00000479941 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 F5H423 210 aaPredicted RBP10.84□□□□□ -0.67
ATG4B-219ENST00000479941 H0Y8X5 98 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 RAD51BO15315 384 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 GDF9O60383 454 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 DFNA5O60443 496 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 CER1O95813 267 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 IFNB1P01574 187 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 THEGLP0DJG4 465 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 CTSKP43235 329 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 RABIFP47224 123 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 LIMK1P53667 647 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 CLDN2P57739 230 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 YPEL5P62699 121 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 BNC1Q01954 994 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 PTSQ03393 145 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 SLC1A5Q15758 541 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 HLA-BQ31612 363 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 LRRC66Q68CR7 880 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 LAYNQ6UX15 382 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 TSPAN33Q86UF1 283 aa10.84□□□□□ -0.67
ATG4B-219ENST00000479941 KLHDC8BQ8IXV7 354 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms