RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SPATS2Q86XZ4 545 aaKnown RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 CACUL1Q86Y37 369 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 GALNT15Q8N3T1 639 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 PGBD5Q8N414 524 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 TSEN2Q8NCE0 465 aaKnown RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 ATL2Q8NHH9 583 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 GRK7Q8WTQ7 553 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 RPL10LQ96L21 214 aaKnown RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 SLC6A18Q96N87 628 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 BBC3Q96PG8 261 aaPredicted RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 TRIB3Q96RU7 358 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 HEMGNQ9BXL5 484 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 TDRD1Q9BXT4 1180 aaKnown RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 ASH1LQ9NR48 2969 aaKnown RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 IL36AQ9UHA7 158 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 SARDHQ9UL12 918 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 RAXQ9Y2V3 346 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 NEU2Q9Y3R4 380 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 ANKRD36A6QL64 1941 aa8.96□□□□□ -0.97
DDX56-211ENST00000479602 A0A1W2PP55 124 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 TCRBV7S2A1N4TA0A589 114 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 AP3B1O00203 1094 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 TLR4O00206 839 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PSMD11O00231 422 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 RNF103O00237 685 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 MUSKO15146 869 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PLRG1O43660 514 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 SUN1O94901 812 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 HLA-DQB2P05538 268 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CTSLP07711 333 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 MMP2P08253 660 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CDK4P11802 303 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 TNNT1P13805 278 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PSMA3P25788 255 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CD38P28907 300 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CASQ1P31415 396 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CD68P34810 354 aaPredicted RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 PAFAH1B1P43034 410 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 METAP1P53582 386 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 ADPRHP54922 357 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 NXPH1P58417 271 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 POLR2LP62875 67 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 DYNLT1P63172 113 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CKAP4Q07065 602 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 CYP4F3Q08477 520 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 SEMA5AQ13591 1074 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 DHX34Q14147 1143 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 LONRF2Q1L5Z9 754 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PARP6Q2NL67 630 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 COL28A1Q2UY09 1125 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CCDC181Q5TID7 509 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 AGBL4Q5VU57 503 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 KAZNQ674X7 775 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 KCTD11Q693B1 232 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 AADACL2Q6P093 401 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 C19orf48Q6RUI8 117 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 NPNTQ6UXI9 565 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 LINGO4Q6UY18 593 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 IQCHQ86VS3 1027 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 NLRP8Q86W28 1048 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 MMAAQ8IVH4 418 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 ZNF567Q8N184 647 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 STK40Q8N2I9 435 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 MFSD2AQ8NA29 543 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 CCNYQ8ND76 341 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 KIF18AQ8NI77 898 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 FAM174AQ8TBP5 190 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PEX13Q92968 403 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 FEM1CQ96JP0 617 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 FAM129AQ9BZQ8 928 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PHACTR1Q9C0D0 580 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 L2HGDHQ9H9P8 463 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 GLOD4Q9HC38 313 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 PREBQ9HCU5 417 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 RBM22Q9NW64 420 aaKnown RBP eCLIP8.96□□□□□ -0.98
DDX56-211ENST00000479602 PAK5Q9P286 719 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 SAE1Q9UBE0 346 aaPredicted RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 HECAQ9UBI9 543 aaPredicted RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 NCKAP1Q9Y2A7 1128 aa8.96□□□□□ -0.98
DDX56-211ENST00000479602 R3HDM2Q9Y2K5 976 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 AAR2Q9Y312 384 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
DDX56-211ENST00000479602 LOC285095A0A1B0GVY8 99 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 GOLGA6CA6NDK9 693 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 GOLGA6BA6NDN3 693 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 LRRC72A6NJI9 287 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 K7ERQ8 282 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 KCNK1O00180 336 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 TOR1BO14657 336 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 PSMD3O43242 534 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 GAS8O95995 478 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 GOLGA6DP0CG33 693 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 GIMD1P0DJR0 217 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ZNF30P17039 623 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 HLA-DPA1P20036 260 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 TEAD1P28347 426 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 RBL1P28749 1068 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 FDFT1P37268 417 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms