RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 LPGAT1Q92604 370 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TRIM15Q9C019 465 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 ILKAPQ9H0C8 392 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TRIT1Q9H3H1 467 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 FANCEQ9HB96 536 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MID2Q9UJV3 735 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MN1Q10571 1320 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SIP14410 1827 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CROCCQ5TZA2 2017 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TCRBV5S1A1TA0A578 114 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 A8MU76 341 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TISP43B9A030 160 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 STX16-NPEPL1H3BU86 382 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 ENPP3O14638 875 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TPP1O14773 563 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SNPHO15079 494 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MAN1A2O60476 641 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 ABCB7O75027 752 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 RFPL2O75678 378 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 RASAL1O95294 804 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 C22orf31O95567 290 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 GSNP06396 782 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 GNA15P30679 374 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 NR4A2P43354 598 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 P2RX3P56373 397 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 ATP6AP1Q15904 470 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TMTC4Q5T4D3 741 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SEL1L3Q68CR1 1132 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TWF2Q6IBS0 349 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 B3GNT9Q6UX72 402 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SPRED1Q7Z699 444 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CBWD2Q8IUF1 395 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 DHRSXQ8N5I4 330 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 LEMD2Q8NC56 503 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CMASQ8NFW8 434 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MAPK15Q8TD08 544 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CDKL2Q92772 493 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 VPS33AQ96AX1 596 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC45A3Q96JT2 553 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MFSD14AQ96MC6 490 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MCEEQ96PE7 176 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 EBNA1BP2Q99848 306 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 CLSTN3Q9BQT9 956 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SH2D3AQ9BRG2 576 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC39A3Q9BRY0 314 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SNX25Q9H3E2 840 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 NOL6Q9H6R4 1146 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 SAE1Q9UBE0 346 aaPredicted RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 AGO2Q9UKV8 859 aaKnown RBP13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
CNKSR3-204ENST00000479339 MYH9P35579 1960 aaKnown RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 AURKAO14965 403 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 LSM8O95777 96 aaKnown RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 TOP3BO95985 862 aaKnown RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 ALDOAP04075 364 aaKnown RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 KRT8P05787 483 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 MSL3P1P0C860 447 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 CDH1P12830 882 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 BMP1P13497 986 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 TCN1P20061 433 aaPredicted RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 KDELR1P24390 212 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 GSTM2P28161 218 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 CD52P31358 61 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 MAGEA3P43357 314 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 IFITM3Q01628 133 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 STX5Q13190 355 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 CCDC85BQ15834 202 aaPredicted RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 SAMD4BQ5PRF9 694 aaKnown RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 TXNRD3NBQ6F5E7 133 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 USP51Q70EK9 711 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 ZBTB46Q86UZ6 589 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 CLIP4Q8N3C7 705 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 LSMEM1Q8N8F7 131 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 Q8N9G6 341 aaPredicted RBP13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 OR2T3Q8NH03 318 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 GRPEL2Q8TAA5 225 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 RTP4Q96DX8 246 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 SPAG4Q9NPE6 437 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 PRDM6Q9NQX0 595 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 CDYLQ9Y232 598 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 RAP2CQ9Y3L5 183 aa13.19□□□□□ -0.3
CNKSR3-204ENST00000479339 TCAF2A6NFQ2 919 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms