RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PEX13Q92968 403 aa21.3■■□□□ 1
SDF4-206ENST00000478938 OMA1Q96E52 524 aa21.3■■□□□ 1
SDF4-206ENST00000478938 C2orf49Q9BVC5 232 aaPredicted RBP21.3■■□□□ 1
SDF4-206ENST00000478938 PCDHB3Q9Y5E6 796 aa21.3■■□□□ 1
SDF4-206ENST00000478938 MYO18AQ92614 2054 aaKnown RBP21.3■■□□□ 1
SDF4-206ENST00000478938 BCLAF3A2AJT9 711 aaKnown RBP21.3■■□□□ 1
SDF4-206ENST00000478938 PTGES3LE9PB15 166 aa21.3■■□□□ 1
SDF4-206ENST00000478938 TBXAS1P24557 533 aaPredicted RBP21.3■■□□□ 1
SDF4-206ENST00000478938 OR3A3P47888 321 aa21.3■■□□□ 1
SDF4-206ENST00000478938 TFAMQ00059 246 aaKnown RBP21.3■■□□□ 1
SDF4-206ENST00000478938 HSPA14Q0VDF9 509 aa21.3■■□□□ 1
SDF4-206ENST00000478938 FAM109AQ8N4B1 249 aa21.3■■□□□ 1
SDF4-206ENST00000478938 TOR1AIP2Q8NFQ8 470 aa21.3■■□□□ 1
SDF4-206ENST00000478938 RBBP8Q99708 897 aa21.3■■□□□ 1
SDF4-206ENST00000478938 SLIRPQ9GZT3 109 aaKnown RBP21.3■■□□□ 1
SDF4-206ENST00000478938 SYBUQ9NX95 663 aa21.3■■□□□ 1
SDF4-206ENST00000478938 BTG4Q9NY30 223 aa21.3■■□□□ 1
SDF4-206ENST00000478938 PDE10AQ9Y233 779 aa21.3■■□□□ 1
SDF4-206ENST00000478938 SNX5Q9Y5X3 404 aa21.3■■□□□ 1
SDF4-206ENST00000478938 ARID2Q68CP9 1835 aa21.3■■□□□ 1
SDF4-206ENST00000478938 LOXHD1Q8IVV2 1947 aa21.29■■□□□ 1
SDF4-206ENST00000478938 SBF2Q86WG5 1849 aa21.29■■□□□ 1
SDF4-206ENST00000478938 AP3D1O14617 1153 aa21.29■■□□□ 1
SDF4-206ENST00000478938 HAT1O14929 419 aa21.29■■□□□ 1
SDF4-206ENST00000478938 ARPC2O15144 300 aa21.29■■□□□ 1
SDF4-206ENST00000478938 GFAPP14136 432 aa21.29■■□□□ 1
SDF4-206ENST00000478938 FCHO2Q0JRZ9 810 aa21.29■■□□□ 1
SDF4-206ENST00000478938 SQLEQ14534 574 aa21.29■■□□□ 1
SDF4-206ENST00000478938 ZNF181Q2M3W8 571 aa21.29■■□□□ 1
SDF4-206ENST00000478938 RETREG3Q86VR2 466 aa21.29■■□□□ 1
SDF4-206ENST00000478938 OR5B17Q8NGF7 314 aa21.29■■□□□ 1
SDF4-206ENST00000478938 URGCPQ8TCY9 931 aa21.29■■□□□ 1
SDF4-206ENST00000478938 PROX1Q92786 737 aa21.29■■□□□ 1
SDF4-206ENST00000478938 SCYL1Q96KG9 808 aa21.29■■□□□ 1
SDF4-206ENST00000478938 AGAP2Q99490 1192 aa21.29■■□□□ 1
SDF4-206ENST00000478938 RPRD1BQ9NQG5 326 aaKnown RBP21.29■■□□□ 1
SDF4-206ENST00000478938 HPS4Q9NQG7 708 aa21.29■■□□□ 1
SDF4-206ENST00000478938 C8orf4Q9NR00 106 aa21.29■■□□□ 1
SDF4-206ENST00000478938 GTSE1Q9NYZ3 720 aa21.29■■□□□ 1
SDF4-206ENST00000478938 MAGED1Q9Y5V3 778 aaPredicted RBP21.29■■□□□ 1
SDF4-206ENST00000478938 C16orf96A6NNT2 1141 aa21.29■■□□□ 1
SDF4-206ENST00000478938 SNX2O60749 519 aa21.29■■□□□ 1
SDF4-206ENST00000478938 PGAM1P18669 254 aa21.29■■□□□ 1
SDF4-206ENST00000478938 FSHRP23945 695 aa21.29■■□□□ 1
SDF4-206ENST00000478938 PKLRP30613 574 aa21.29■■□□□ 1
SDF4-206ENST00000478938 GRTP1Q5TC63 336 aa21.29■■□□□ 1
SDF4-206ENST00000478938 PXDC1Q5TGL8 231 aa21.29■■□□□ 1
SDF4-206ENST00000478938 METTL4Q8N3J2 472 aa21.29■■□□□ 1
SDF4-206ENST00000478938 SMG8Q8ND04 991 aaKnown RBP21.29■■□□□ 1
SDF4-206ENST00000478938 GIPC2Q8TF65 315 aa21.29■■□□□ 1
SDF4-206ENST00000478938 CPNE1Q99829 537 aa21.29■■□□□ 1
SDF4-206ENST00000478938 ATP13A2Q9NQ11 1180 aa21.29■■□□□ 1
SDF4-206ENST00000478938 INTS10Q9NVR2 710 aaKnown RBP21.29■■□□□ 1
SDF4-206ENST00000478938 A0A1W2PQ72 361 aa21.28■■□□□ 1
SDF4-206ENST00000478938 ZNF99A8MXY4 864 aaPredicted RBP21.28■■□□□ 1
SDF4-206ENST00000478938 APOL1O14791 398 aa21.28■■□□□ 1
SDF4-206ENST00000478938 UBDO15205 165 aa21.28■■□□□ 1
SDF4-206ENST00000478938 ENDOD1O94919 500 aa21.28■■□□□ 1
SDF4-206ENST00000478938 MT-CO1P00395 513 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CHRNA1P02708 482 aa21.28■■□□□ 1
SDF4-206ENST00000478938 SAT1P21673 171 aa21.28■■□□□ 1
SDF4-206ENST00000478938 PCMT1P22061 227 aa21.28■■□□□ 1
SDF4-206ENST00000478938 OR2B6P58173 313 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CAPRIN1Q14444 709 aaKnown RBP21.28■■□□□ 1
SDF4-206ENST00000478938 CTU2Q2VPK5 515 aaKnown RBP21.28■■□□□ 1
SDF4-206ENST00000478938 MFSD14BQ5SR56 506 aa21.28■■□□□ 1
SDF4-206ENST00000478938 NLGN4XQ8N0W4 816 aa21.28■■□□□ 1
SDF4-206ENST00000478938 SVOPQ8N4V2 548 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CHDHQ8NE62 594 aaPredicted RBP21.28■■□□□ 1
SDF4-206ENST00000478938 SPPL2BQ8TCT7 592 aa21.28■■□□□ 1
SDF4-206ENST00000478938 PMEPA1Q969W9 287 aa21.28■■□□□ 1
SDF4-206ENST00000478938 BIRC7Q96CA5 298 aa21.28■■□□□ 1
SDF4-206ENST00000478938 NXNL1Q96CM4 212 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CPXM1Q96SM3 734 aa21.28■■□□□ 1
SDF4-206ENST00000478938 SLC25A23Q9BV35 468 aa21.28■■□□□ 1
SDF4-206ENST00000478938 PAK1IP1Q9NWT1 392 aaPredicted RBP21.28■■□□□ 1
SDF4-206ENST00000478938 SRP68Q9UHB9 627 aaKnown RBP21.28■■□□□ 1
SDF4-206ENST00000478938 DNMT3LQ9UJW3 386 aa21.28■■□□□ 1
SDF4-206ENST00000478938 DAGLAQ9Y4D2 1042 aa21.28■■□□□ 1
SDF4-206ENST00000478938 ZFC3H1O60293 1989 aaKnown RBP21.28■■□□□ 1
SDF4-206ENST00000478938 NCK1P16333 377 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CLDN10P78369 228 aa21.28■■□□□ 1
SDF4-206ENST00000478938 SEMA5AQ13591 1074 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CDO1Q16878 200 aa21.28■■□□□ 1
SDF4-206ENST00000478938 XKR9Q5GH70 373 aa21.28■■□□□ 1
SDF4-206ENST00000478938 NXNL2Q5VZ03 156 aa21.28■■□□□ 1
SDF4-206ENST00000478938 FAM205BPQ63HN1 556 aa21.28■■□□□ 1
SDF4-206ENST00000478938 LCN8Q6JVE9 175 aa21.28■■□□□ 1
SDF4-206ENST00000478938 IDO2Q6ZQW0 420 aa21.28■■□□□ 1
SDF4-206ENST00000478938 TMEM151AQ8N4L1 468 aa21.28■■□□□ 1
SDF4-206ENST00000478938 HDAC2Q92769 488 aaKnown RBP21.28■■□□□ 1
SDF4-206ENST00000478938 ISL2Q96A47 359 aa21.28■■□□□ 1
SDF4-206ENST00000478938 CERS2Q96G23 380 aa21.28■■□□□ 1
SDF4-206ENST00000478938 HSFY1Q96LI6 401 aa21.28■■□□□ 1
SDF4-206ENST00000478938 TTC24A2A3L6 582 aaPredicted RBP21.27■■□□□ 1
SDF4-206ENST00000478938 B4GALT4O60513 344 aa21.27■■□□□ 1
SDF4-206ENST00000478938 LDLRP01130 860 aa21.27■■□□□ 1
SDF4-206ENST00000478938 IL4RP24394 825 aa21.27■■□□□ 1
SDF4-206ENST00000478938 IL12AP29459 219 aa21.27■■□□□ 1
SDF4-206ENST00000478938 PTGS2P35354 604 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms