RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 STON1Q9Y6Q2 735 aa3.4□□□□□ -1.87
TARDBP-208ENST00000477447 UTYO14607 1347 aa3.4□□□□□ -1.87
TARDBP-208ENST00000477447 FAM237BA0A1B0GVD1 139 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 hDV102S1A0JD36 115 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 PGPEP1LA6NFU8 196 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 WNT9BO14905 357 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 HNRNPCL1O60812 293 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 NKX2-2O95096 273 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SCGB1D1O95968 90 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 GLUD1P00367 558 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 G6PDP11413 515 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 CAPN3P20807 821 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 HNRNPH1P31943 449 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 ARL3P36405 182 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 GLUD2P49448 558 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 COMPP49747 757 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 FOXG1P55316 489 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SETQ01105 290 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 BNC1Q01954 994 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 DDR1Q08345 913 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 MED22Q15528 200 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 EFNB3Q15768 340 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 C2orf68Q2NKX9 166 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 EIF2S3LQ2VIR3 472 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SLC45A4Q5BKX6 768 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 PPP6R3Q5H9R7 873 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 GPATCH4Q5T3I0 446 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 LRCH2Q5VUJ6 765 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SNX30Q5VWJ9 437 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 ANKRD54Q6NXT1 300 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 CYP20A1Q6UW02 462 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 B3GNT6Q6ZMB0 384 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 NEK10Q6ZWH5 1172 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 MTSS1LQ765P7 747 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 ADSSL1Q8N142 457 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 IQCF1Q8N6M8 205 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 PDILTQ8N807 584 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 FAM216AQ8WUB2 273 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 PHF21BQ96EK2 531 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 MMABQ96EY8 250 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 THOC3Q96J01 351 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 LYZL4Q96KX0 146 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 WDFY2Q96P53 400 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SLITRK1Q96PX8 696 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 FAM110AQ9BQ89 295 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 TMEM47Q9BQJ4 181 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 ZPBPQ9BS86 351 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 HAUS8Q9BT25 410 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 MMTAG2Q9BU76 263 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 IFIH1Q9BYX4 1025 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 MAF1Q9H063 256 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 ESRP2Q9H6T0 727 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 POLR1BQ9H9Y6 1135 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SLC28A3Q9HAS3 691 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 FBRSL1Q9HCM7 1045 aaKnown RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 MKKSQ9NPJ1 570 aaPredicted RBP3.39□□□□□ -1.87
TARDBP-208ENST00000477447 CNGB3Q9NQW8 809 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 ABI3Q9P2A4 366 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 SLC9A2Q9UBY0 812 aa3.39□□□□□ -1.87
TARDBP-208ENST00000477447 TDRD9Q8NDG6 1382 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 A0A1W2PQF6 199 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 A0A1W2PRG0 241 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 PI4KAP2A4QPH2 592 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 USO1O60763 962 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 RNASEH2AO75792 299 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 IPO7O95373 1038 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 T-ENOLP0DO92 83 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 PSMA4P25789 261 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 RXRGP48443 463 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 KRTAP10-11P60412 298 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 LTBQ06643 244 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 TRAF2Q12933 501 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 CSTF3Q12996 717 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 TRAF3Q13114 568 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 DHX34Q14147 1143 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 SIM2Q14190 667 aaPredicted RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 USP41Q3LFD5 358 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 XKR9Q5GH70 373 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 CXorf66Q5JRM2 361 aaPredicted RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 C6orf141Q5SZD1 244 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 TTI2Q6NXR4 508 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 PDXDC1Q6P996 788 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 ZDHHC17Q8IUH5 632 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 SPATA2LQ8IUW3 424 aaPredicted RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 NEK9Q8TD19 979 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 WASF1Q92558 559 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 MTBPQ96DY7 904 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 MED30Q96HR3 178 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 SLC41A2Q96JW4 573 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 MAP7D2Q96T17 732 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 C1QTNF5Q9BXJ0 243 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 UBA5Q9GZZ9 404 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 HIPK2Q9H2X6 1198 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 NDST4Q9H3R1 872 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 PPP1R3EQ9H7J1 279 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 NOX4Q9NPH5 578 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 HINT3Q9NQE9 182 aaKnown RBP3.38□□□□□ -1.87
TARDBP-208ENST00000477447 OCIAD1Q9NX40 245 aa3.38□□□□□ -1.87
TARDBP-208ENST00000477447 EHD2Q9NZN4 543 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms