RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 CEP41Q9BYV8 373 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 STN1Q9H668 368 aaKnown RBP7.85□□□□□ -1.15
RBM39-230ENST00000476806 MAGEE1Q9HCI5 957 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 GKN1Q9NS71 199 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 NDFIP2Q9NV92 336 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.85□□□□□ -1.15
RBM39-230ENST00000476806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.85□□□□□ -1.15
RBM39-230ENST00000476806 DNMT3BQ9UBC3 853 aaKnown RBP7.85□□□□□ -1.15
RBM39-230ENST00000476806 VPS51Q9UID3 782 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 TMCO1Q9UM00 188 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 MIA3Q5JRA6 1907 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 NYNRINQ9P2P1 1898 aaKnown RBP7.85□□□□□ -1.15
RBM39-230ENST00000476806 NUP205Q92621 2012 aa7.85□□□□□ -1.15
RBM39-230ENST00000476806 CHD9Q3L8U1 2897 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ZCWPW2A0A1B0GU75 182 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 LCHNA4D1U4 455 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 MROH6A6NGR9 719 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ANKRD66B4E2M5 251 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 TYROBPO43914 113 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 RPP40O75818 363 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 POP4O95707 220 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 VIMP08670 466 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 FOSL2P15408 326 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 STMN1P16949 149 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 CR2P20023 1033 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 CD9P21926 228 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PSMA3P25788 255 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ACVRL1P37023 503 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 CSKP41240 450 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ADARP55265 1226 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 DSC2Q02487 901 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 SFSWAPQ12872 951 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 ITIH4Q14624 930 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 POU6F1Q14863 301 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 TEAD2Q15562 447 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PCSK7Q16549 785 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ZSCAN26Q16670 478 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 FAM83EQ2M2I3 478 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 FASTKD1Q53R41 847 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 ATAT1Q5SQI0 421 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 C9orf50Q5SZB4 431 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 AGAP9Q5VTM2 703 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 NEPROQ6NW34 567 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ARHGAP36Q6ZRI8 547 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 VASH1Q7L8A9 365 aaPredicted RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 OTOP3Q7RTS5 596 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 YTHDF3Q7Z739 585 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 STRA8Q7Z7C7 330 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 TBC1D1Q86TI0 1168 aaPredicted RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 PRPF39Q86UA1 669 aaKnown RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 CIR1Q86X95 450 aaPredicted RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 BBS7Q8IWZ6 715 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 OTUD6BQ8N6M0 293 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 BEND7Q8N7W2 519 aaPredicted RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 ANKRD42Q8N9B4 389 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 C2CD4AQ8NCU7 369 aaPredicted RBP7.84□□□□□ -1.15
RBM39-230ENST00000476806 OR7D4Q8NG98 312 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 SPATA22Q8NHS9 363 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PPP1R14CQ8TAE6 165 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ARRDC2Q8TBH0 407 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PPP4R1Q8TF05 950 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 HEXDCQ8WVB3 486 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 MSANTD3Q96H12 275 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 MYO19Q96H55 970 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PPP1R16AQ96I34 528 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PWWP2AQ96N64 755 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 GPR22Q99680 433 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 TSSK1BQ9BXA7 367 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 FBRSQ9HAH7 460 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 SYTL2Q9HCH5 934 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 ZFP14Q9HCL3 533 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 TREX1Q9NSU2 369 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 KLHL14Q9P2G3 628 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PHTF1Q9UMS5 762 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 SLC27A6Q9Y2P4 619 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 STARD13Q9Y3M8 1113 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 PCDHB1Q9Y5F3 818 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 BDP1A6H8Y1 2624 aa7.84□□□□□ -1.15
RBM39-230ENST00000476806 A0A0D9SEW6 157 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 GOLGA8QA0A0J9YX86 632 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 RGSL1A5PLK6 1076 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 GOLGA8OA6NCC3 632 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 NEDD8-MDP1E9PL57 170 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 GOLGA8NF8WBI6 632 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 STX7O15400 261 aaKnown RBP7.83□□□□□ -1.16
RBM39-230ENST00000476806 GREM1O60565 184 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 TSPAN3O60637 253 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 HNRNPCL1O60812 293 aaKnown RBP7.83□□□□□ -1.16
RBM39-230ENST00000476806 ZMPSTE24O75844 475 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 DCTN3O75935 186 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 VAPBO95292 243 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 TGDSO95455 350 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 ASMTLO95671 621 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 RBP1P09455 135 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 SPATA31D3P0C874 917 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 CYP2A6P11509 494 aaPredicted RBP7.83□□□□□ -1.16
RBM39-230ENST00000476806 ADH5P11766 374 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 TYRP14679 529 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 EPCAMP16422 314 aa7.83□□□□□ -1.16
RBM39-230ENST00000476806 TAC1P20366 129 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms