RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 DENND6BQ8NEG7 585 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 MAGOHBQ96A72 148 aaKnown RBP29.65■■■□□ 2.34
HOXB3-208ENST00000476342 SLCO1B1Q9Y6L6 691 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 FANCGO15287 622 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 HEXIM1O94992 359 aaKnown RBP29.64■■■□□ 2.34
HOXB3-208ENST00000476342 ZNF30P17039 623 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 HNF1BP35680 557 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 STAT4Q14765 748 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 SKA1Q96BD8 255 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 CAPZA3Q96KX2 299 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 C16orf45Q96MC5 204 aaPredicted RBP29.64■■■□□ 2.34
HOXB3-208ENST00000476342 LENG8Q96PV6 779 aaPredicted RBP29.64■■■□□ 2.34
HOXB3-208ENST00000476342 LYSMD1Q96S90 227 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 GORASP1Q9BQQ3 440 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 SMOC1Q9H4F8 434 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 PAK5Q9P286 719 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 SLC6A14Q9UN76 642 aa29.64■■■□□ 2.34
HOXB3-208ENST00000476342 CACNA1EQ15878 2313 aa29.64■■■□□ 2.33
HOXB3-208ENST00000476342 LOC285095A0A1B0GVY8 99 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 PATE3B3GLJ2 98 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 PSMD11O00231 422 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 CD38P28907 300 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 KCNJ1P48048 391 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 CNGA3Q16281 694 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 CYP1B1Q16678 543 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 TMEM145Q8NBT3 493 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 ATL2Q8NHH9 583 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 MYOCQ99972 504 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 PARD6AQ9NPB6 346 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 FZD3Q9NPG1 666 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 RNF14Q9UBS8 474 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 COQ6Q9Y2Z9 468 aa29.63■■■□□ 2.33
HOXB3-208ENST00000476342 HLA-DPA1P20036 260 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 LHCGRP22888 699 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 PAFAH1B1P43034 410 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 AGERQ15109 404 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 C4orf22Q6V702 233 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 CREG2Q8IUH2 290 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 SRPK1Q96SB4 655 aaKnown RBP29.62■■■□□ 2.33
HOXB3-208ENST00000476342 CAPN10Q9HC96 672 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 KCTD5Q9NXV2 234 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 METTL18O95568 372 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 FDFT1P37268 417 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 ACOX1Q15067 660 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 LRRC66Q68CR7 880 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 CRTC1Q6UUV9 634 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 TSPAN33Q86UF1 283 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 FAM174AQ8TBP5 190 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 HS3ST3A1Q9Y663 406 aa29.62■■■□□ 2.33
HOXB3-208ENST00000476342 FPGTO14772 594 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 PSMD3O43242 534 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 PHF2O75151 1096 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 FGF1P05230 155 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 CSNK1EP49674 416 aaKnown RBP29.61■■■□□ 2.33
HOXB3-208ENST00000476342 PTPRRQ15256 657 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 SLC1A5Q15758 541 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 DENND2CQ68D51 928 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 TCEAL6Q6IPX3 200 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 CCDC137Q6PK04 289 aaKnown RBP29.61■■■□□ 2.33
HOXB3-208ENST00000476342 PRR23CQ6ZRP0 262 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 IQCHQ86VS3 1027 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 KLHDC8BQ8IXV7 354 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 MFSD2AQ8NA29 543 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 TCEAL3Q969E4 200 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 SMIM14Q96QK8 99 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 KLF6Q99612 283 aaPredicted RBP29.61■■■□□ 2.33
HOXB3-208ENST00000476342 FICDQ9BVA6 458 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 MAGEE1Q9HCI5 957 aa29.61■■■□□ 2.33
HOXB3-208ENST00000476342 C1orf232A0A0U1RR37 186 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 WNT9AO14904 365 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 MAGEC1O60732 1142 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 RECQL5O94762 991 aaPredicted RBP29.6■■■□□ 2.33
HOXB3-208ENST00000476342 SYPP08247 313 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 ATXN1LP0C7T5 689 aaKnown RBP29.6■■■□□ 2.33
HOXB3-208ENST00000476342 TGM1P22735 817 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 COILP38432 576 aaPredicted RBP29.6■■■□□ 2.33
HOXB3-208ENST00000476342 FNTAP49354 379 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 C21orf59P57076 290 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 IRX4P78413 519 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 OVGP1Q12889 678 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 LRRC14Q15048 493 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 SF3A2Q15428 464 aaKnown RBP29.6■■■□□ 2.33
HOXB3-208ENST00000476342 SIRPB2Q5JXA9 342 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 FAXCQ5TGI0 409 aa29.6■■■□□ 2.33
HOXB3-208ENST00000476342 A0A1W2PR77 199 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 VILLO15195 856 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 RAD51BO15315 384 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 ETS1P14921 441 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 TTC27Q6P3X3 843 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 SLC25A41Q8N5S1 370 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 GLIS1Q8NBF1 620 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 TP53I13Q8NBR0 393 aaPredicted RBP29.59■■■□□ 2.33
HOXB3-208ENST00000476342 CCHCR1Q8TD31 782 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 GRK7Q8WTQ7 553 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 CENPTQ96BT3 561 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 COQ10AQ96MF6 247 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 ZDHHC5Q9C0B5 715 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 LRRC40Q9H9A6 602 aa29.59■■■□□ 2.33
HOXB3-208ENST00000476342 FEZ2Q9UHY8 353 aaPredicted RBP29.59■■■□□ 2.33
HOXB3-208ENST00000476342 CA5BQ9Y2D0 317 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms