RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 GRK7Q8WTQ7 553 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 PDCD6IPQ8WUM4 868 aaKnown RBP10.39□□□□□ -0.75
CASC3-204ENST00000474190 GAB3Q8WWW8 586 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 RAB7BQ96AH8 199 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 PPP1R16AQ96I34 528 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 ZNF778Q96MU6 729 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 TRIM56Q9BRZ2 755 aaKnown RBP10.39□□□□□ -0.75
CASC3-204ENST00000474190 FAM126AQ9BYI3 521 aaPredicted RBP10.39□□□□□ -0.75
CASC3-204ENST00000474190 BTBD1Q9H0C5 482 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 EPC1Q9H2F5 836 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 LRRC40Q9H9A6 602 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 SGK2Q9HBY8 427 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 MAGEE1Q9HCI5 957 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 FEZ2Q9UHY8 353 aaPredicted RBP10.39□□□□□ -0.75
CASC3-204ENST00000474190 SNX24Q9Y343 169 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 SHROOM3Q8TF72 1996 aa10.39□□□□□ -0.75
CASC3-204ENST00000474190 A0A1W2PQ67 120 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 A0A1W2PQU0 124 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 IGLON5A6NGN9 336 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 MROH6A6NGR9 719 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 ERI2A8K979 691 aaKnown RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 METTL12A8MUP2 240 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 MMP20O60882 483 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 NEBLO76041 1014 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 CLDN7O95471 211 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 SEMA4FO95754 770 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 GAS8O95995 478 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 SOD1P00441 154 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 FGF1P05230 155 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 ACADMP11310 421 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 C6P13671 934 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 VIPR1P32241 457 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 NBL1P41271 181 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 LIG3P49916 1009 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 ZNF140P52738 457 aaPredicted RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 DRG2P55039 364 aaKnown RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 BASP1P80723 227 aaKnown RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 PPP1R7Q15435 360 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 TTC31Q49AM3 519 aaPredicted RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 FNBP1LQ5T0N5 605 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 LRRC66Q68CR7 880 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 PMS2CLQ68D20 193 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 LRRC8BQ6P9F7 803 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 FBXL19Q6PCT2 694 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 HORMAD1Q86X24 394 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 PGBD3Q8N328 593 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 CEP112Q8N8E3 955 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 TMEM145Q8NBT3 493 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 CENPTQ96BT3 561 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 BIRC7Q96CA5 298 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 ZC3H10Q96K80 434 aaKnown RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 SERPINB12Q96P63 405 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 OMDQ99983 421 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 FERMT1Q9BQL6 677 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 WRAP53Q9BUR4 548 aaKnown RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 GPR174Q9BXC1 333 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 TRIM31Q9BZY9 425 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 IRF2BPLQ9H1B7 796 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 CAAP1Q9H8G2 361 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 PREBQ9HCU5 417 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 TMPRSS11EQ9UL52 423 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.38□□□□□ -0.75
CASC3-204ENST00000474190 COQ6Q9Y2Z9 468 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 ZNF711Q9Y462 761 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 PCDHGA2Q9Y5H1 932 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 R4GN57 208 aa10.38□□□□□ -0.75
CASC3-204ENST00000474190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 TSPAN6O43657 245 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 RNGTTO60942 597 aaKnown RBP10.37□□□□□ -0.75
CASC3-204ENST00000474190 BANF1O75531 89 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 RPP40O75818 363 aaKnown RBP10.37□□□□□ -0.75
CASC3-204ENST00000474190 ARNTP27540 789 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 OXTRP30559 389 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 ADCY8P40145 1251 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 ETV3P41162 512 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 CCR5P51681 352 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 ARSDP51689 593 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 ITGA8P53708 1063 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 FAM193AP78312 1265 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 CRADDP78560 199 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 CDK16Q00536 496 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 PRPSAP1Q14558 356 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 WSCD2Q2TBF2 565 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 OTOGLQ3ZCN5 2332 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 USP39Q53GS9 565 aaKnown RBP10.37□□□□□ -0.75
CASC3-204ENST00000474190 TPRG1LQ5T0D9 272 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 UBAP2Q5T6F2 1119 aaKnown RBP10.37□□□□□ -0.75
CASC3-204ENST00000474190 IZUMO3Q5VZ72 239 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 KIAA0895LQ68EN5 471 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 NEK5Q6P3R8 708 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 MAATS1Q7Z4T9 603 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 HOOK3Q86VS8 718 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 PPIL6Q8IXY8 311 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 TMEFF1Q8IYR6 380 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 DEFB119Q8N690 84 aa10.37□□□□□ -0.75
CASC3-204ENST00000474190 SUMF1Q8NBK3 374 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms