RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SIN3AQ96ST3 1273 aa4.62□□□□□ -1.67
CD46-213ENST00000471987 LDLRP01130 860 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 APOHP02749 345 aaPredicted RBP4.61□□□□□ -1.67
CD46-213ENST00000471987 ETFAP13804 333 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 FMO5P49326 533 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 ATP12AP54707 1039 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 MMEL1Q495T6 779 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 ADGRG6Q86SQ4 1221 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 NFE4Q86UQ8 179 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 ODF3L1Q8IXM7 274 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 FBXL8Q96CD0 374 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 CDCA5Q96FF9 252 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 HAUS8Q9BT25 410 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 NUF2Q9BZD4 464 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 PLEKHA5Q9HAU0 1116 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 IL1RAPL1Q9NZN1 696 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 PEMTQ9UBM1 199 aa4.61□□□□□ -1.67
CD46-213ENST00000471987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.61□□□□□ -1.67
CD46-213ENST00000471987 LILRA5A6NI73 299 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 CAPN9O14815 690 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 HLA-DOBP13765 273 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 TIMP3P35625 211 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 USP8P40818 1118 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 TMPOP42166 694 aaKnown RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 GRK6P43250 576 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 RAD23BP54727 409 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 ERVK11-1P61568 191 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 PITX1P78337 314 aaPredicted RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 EFR3AQ14156 821 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 VEPH1Q14D04 833 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 TAF5Q15542 800 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 KCNT1Q5JUK3 1230 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 ANO1Q5XXA6 986 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 GPAT4Q86UL3 456 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 EPHX4Q8IUS5 362 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 CHERPQ8IWX8 916 aaKnown RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 LSM14AQ8ND56 463 aaKnown RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 CTCFLQ8NI51 663 aaPredicted RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 GRAPLQ8TC17 118 aaPredicted RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 NOC3LQ8WTT2 800 aaKnown RBP4.6□□□□□ -1.67
CD46-213ENST00000471987 RND1Q92730 232 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 EYA3Q99504 573 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 SNTG1Q9NSN8 517 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 TAAR2Q9P1P5 351 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 TINAGQ9UJW2 476 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 RCOR1Q9UKL0 485 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 NOTCH3Q9UM47 2321 aa4.6□□□□□ -1.67
CD46-213ENST00000471987 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 GOLGA6L9A6NEM1 432 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 AMBPP02760 352 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 MMP2P08253 660 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 CD53P19397 219 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 GPD2P43304 727 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 CLCNKAP51800 687 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 TAF11Q15544 211 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 PDS5AQ29RF7 1337 aaKnown RBP4.59□□□□□ -1.67
CD46-213ENST00000471987 KRT24Q2M2I5 525 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 LRRC8EQ6NSJ5 796 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 GFRALQ6UXV0 394 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 MTSS1LQ765P7 747 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 TAOK1Q7L7X3 1001 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.59□□□□□ -1.67
CD46-213ENST00000471987 TADA2BQ86TJ2 420 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 NOXA1Q86UR1 476 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.59□□□□□ -1.67
CD46-213ENST00000471987 BEST2Q8NFU1 509 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 TNIP2Q8NFZ5 429 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 MKKSQ9NPJ1 570 aaPredicted RBP4.59□□□□□ -1.67
CD46-213ENST00000471987 KIAA1456Q9P272 454 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 STON1Q9Y6Q2 735 aa4.59□□□□□ -1.67
CD46-213ENST00000471987 CCDC194A0A1B0GVG4 234 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 PRSS1P07477 247 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 RNF224P0DH78 156 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 AGAP20933 346 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 RRM1P23921 792 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 POU1F1P28069 291 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 ARL4CP56559 192 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 ZNF667Q5HYK9 610 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 TRNP1Q6NT89 227 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 RGMBQ6NW40 437 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 SLC36A4Q6YBV0 504 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 TMEM219Q86XT9 240 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 KMT5CQ86Y97 462 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 FOXRED2Q8IWF2 684 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 WDR63Q8IWG1 891 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 BBS10Q8TAM1 723 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 CCT6BQ92526 530 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 REEP2Q9BRK0 252 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 C1QTNF5Q9BXJ0 243 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 CSTL1Q9H114 145 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 ESRP2Q9H6T0 727 aaKnown RBP4.58□□□□□ -1.68
CD46-213ENST00000471987 ZNF696Q9H7X3 374 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 DDX4Q9NQI0 724 aaKnown RBP4.58□□□□□ -1.68
CD46-213ENST00000471987 TMEM30AQ9NV96 361 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 RALYQ9UKM9 306 aaKnown RBP4.58□□□□□ -1.68
CD46-213ENST00000471987 AMDHD2Q9Y303 409 aa4.58□□□□□ -1.68
CD46-213ENST00000471987 SNED1Q8TER0 1413 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms