RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
SYNE4-204ENST00000465425 KCTD3Q9Y597 815 aa18.37■□□□□ 0.53
SYNE4-204ENST00000465425 ATP6AP2A0A1C7CYW4 349 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 ATP6AP2O75787 350 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 TBX18O95935 607 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 PENKP01210 267 aaPredicted RBP18.36■□□□□ 0.53
SYNE4-204ENST00000465425 GRIA2P42262 883 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 PSMD8P48556 350 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 IL10RBQ08334 325 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 MRNIPQ6NTE8 343 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 PAOXQ6QHF9 649 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 IFNL1Q8IU54 200 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 TICAM1Q8IUC6 712 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 TRIB2Q92519 343 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 IGSF8Q969P0 613 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 TOP1MTQ969P6 601 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 ATP6V1E2Q96A05 226 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 L3HYPDHQ96EM0 354 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 C19orf60Q96EN9 201 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 POLR1EQ9GZS1 481 aaKnown RBP18.36■□□□□ 0.53
SYNE4-204ENST00000465425 PCDHAC1Q9H158 963 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.36■□□□□ 0.53
SYNE4-204ENST00000465425 PRG3Q9Y2Y8 225 aaPredicted RBP18.36■□□□□ 0.53
SYNE4-204ENST00000465425 PCDHB5Q9Y5E4 795 aa18.36■□□□□ 0.53
SYNE4-204ENST00000465425 IGLV3-10A0A075B6K4 115 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 FBP2O00757 339 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 UBFD1O14562 309 aaKnown RBP18.35■□□□□ 0.53
SYNE4-204ENST00000465425 MRASO14807 208 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 LDB2O43679 373 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 HMBSP08397 361 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 ATXN1LP0C7T5 689 aaKnown RBP18.35■□□□□ 0.53
SYNE4-204ENST00000465425 HDCP19113 662 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 YWHAQP27348 245 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 OR1E1P30953 314 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 HERVK_113P63132 956 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 ILF2Q12905 390 aaKnown RBP18.35■□□□□ 0.53
SYNE4-204ENST00000465425 LAMB3Q13751 1172 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 IHHQ14623 411 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 KCNA10Q16322 511 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 ARRDC2Q8TBH0 407 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 GPR152Q8TDT2 470 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 FBXO32Q969P5 355 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 EME1Q96AY2 570 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 SEMA3CQ99985 751 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 ERVK-6Q9BXR3 956 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 AP4S1Q9Y587 144 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 LOC285095A0A1B0GVY8 99 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 SEPT4O43236 478 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 B4GALT3O60512 393 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
SYNE4-204ENST00000465425 PGM3O95394 542 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 KCNC1P48547 511 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 RALGDSQ12967 914 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 ZNF235Q14590 738 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 PARP15Q460N3 678 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 C10orf120Q5SQS8 335 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 IL23RQ5VWK5 629 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 RAB44Q7Z6P3 723 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-204ENST00000465425 SATL1Q86VE3 508 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 CIR1Q86X95 450 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-204ENST00000465425 PGBD5Q8N414 524 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 SNX31Q8N9S9 440 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 ARL5AQ9Y689 179 aa18.35■□□□□ 0.53
SYNE4-204ENST00000465425 SMIM31A0A1B0GVY4 71 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 NRP2O60462 931 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 SRP72O76094 671 aaKnown RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 TNFAIP8O95379 198 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 STAMBPO95630 424 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 GOT2P00505 430 aaKnown RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 HOXB8P17481 243 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 CTGFP29279 349 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 PBX3P40426 434 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 NFKB2Q00653 900 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 TRIP4Q15650 581 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 MAP7D1Q3KQU3 841 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 LAYNQ6UX15 382 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 LARP4Q71RC2 724 aaKnown RBP eCLIP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 PTERQ96BW5 349 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 VCX3AQ9NNX9 186 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 UBAP1Q9NZ09 502 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 NDUFA13Q9P0J0 144 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 CROTQ9UKG9 612 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 SARDHQ9UL12 918 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 CD3EAPO15446 510 aaKnown RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 ADAMTS4O75173 837 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 WISP3O95389 354 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 CLPTM1O96005 669 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 FGF1P05230 155 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 HLA-DPA1P20036 260 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 CDH13P55290 713 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 SERINC3Q13530 473 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 KIF19Q2TAC6 998 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 CLYBLQ8N0X4 340 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 TMEM102Q8N9M5 508 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 OR9I1Q8NGQ6 314 aa18.34■□□□□ 0.53
SYNE4-204ENST00000465425 DNAJC1Q96KC8 554 aaKnown RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms