RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 NPIPB15A6NHN6 443 aaPredicted RBP22.22■■□□□ 1.15
UBA3-206ENST00000464605 SIGLEC6O43699 453 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 VIPR1P32241 457 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 PEX5P50542 639 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 VAV2P52735 878 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 HNRNPKP61978 463 aaKnown RBP eCLIP22.22■■□□□ 1.15
UBA3-206ENST00000464605 DYNLT1P63172 113 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 PDK1Q15118 436 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 LLGL1Q15334 1064 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 ARMC12Q5T9G4 340 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 NYAP1Q6ZVC0 841 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 B4GALNT4Q76KP1 1039 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 PELI3Q8N2H9 469 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.22■■□□□ 1.15
UBA3-206ENST00000464605 OR4C6Q8NH72 309 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 ZNF830Q96NB3 372 aaPredicted RBP22.22■■□□□ 1.15
UBA3-206ENST00000464605 APOOQ9BUR5 198 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 TDRD1Q9BXT4 1180 aaKnown RBP22.22■■□□□ 1.15
UBA3-206ENST00000464605 SAE1Q9UBE0 346 aaPredicted RBP22.22■■□□□ 1.15
UBA3-206ENST00000464605 ZZEF1O43149 2961 aa22.22■■□□□ 1.15
UBA3-206ENST00000464605 A0A0U1RQJ8 604 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 A0A0U1RQS6 177 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 HEXIM1O94992 359 aaKnown RBP22.21■■□□□ 1.15
UBA3-206ENST00000464605 JUNDP17535 347 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 THOP1P52888 689 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 ZNF211Q13398 564 aaPredicted RBP22.21■■□□□ 1.15
UBA3-206ENST00000464605 PTK2BQ14289 1009 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 MACC1Q6ZN28 852 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 DAAM2Q86T65 1068 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 RCOR2Q8IZ40 523 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 RBFAQ8N0V3 343 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 PAF1Q8N7H5 531 aa22.21■■□□□ 1.15
UBA3-206ENST00000464605 ZNF548Q8NEK5 533 aaPredicted RBP22.21■■□□□ 1.15
UBA3-206ENST00000464605 hCG_1818297A0A087WSY0 165 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 SCAMP1O15126 338 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 CST8O60676 142 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 NEBLO76041 1014 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 ZRANB2O95218 330 aaKnown RBP eCLIP22.2■■□□□ 1.14
UBA3-206ENST00000464605 ALPIP09923 528 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 PECAM1P16284 738 aaPredicted RBP22.2■■□□□ 1.14
UBA3-206ENST00000464605 CTPS1P17812 591 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 TRIM23P36406 574 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 ACADVLP49748 655 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 AP1B1Q10567 949 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 MTM1Q13496 603 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 TFDP2Q14188 446 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 ODF2Q5BJF6 829 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 TFDP3Q5H9I0 405 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 HSD11B1LQ7Z5J1 315 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 TSPAN33Q86UF1 283 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 LRRC57Q8N9N7 239 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 EXD1Q8NHP7 514 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 ZCCHC14Q8WYQ9 949 aaKnown RBP22.2■■□□□ 1.14
UBA3-206ENST00000464605 FUBP1Q96AE4 644 aaKnown RBP22.2■■□□□ 1.14
UBA3-206ENST00000464605 ANP32EQ9BTT0 268 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 CEP41Q9BYV8 373 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 CHKBQ9Y259 395 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 TTLL3Q9Y4R7 772 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 OR1A2Q9Y585 309 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 PCDHGA1Q9Y5H4 931 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 CFAP47Q6ZTR5 3102 aa22.2■■□□□ 1.14
UBA3-206ENST00000464605 A0A0J9YYE9 177 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 FFAR2O15552 330 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 IPO7O95373 1038 aaKnown RBP22.19■■□□□ 1.14
UBA3-206ENST00000464605 TRBC1P01850 177 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 PCCBP05166 539 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 CTNNA1P35221 906 aaKnown RBP22.19■■□□□ 1.14
UBA3-206ENST00000464605 HNF1BP35680 557 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 NR2C2P49116 596 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 SKOR1P84550 965 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 NFATC4Q14934 902 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 ACOX1Q15067 660 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 PRKD1Q15139 912 aaPredicted RBP22.19■■□□□ 1.14
UBA3-206ENST00000464605 KAZNQ674X7 775 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 KCTD16Q68DU8 428 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 ESRP1Q6NXG1 681 aaKnown RBP22.19■■□□□ 1.14
UBA3-206ENST00000464605 TMPRSS7Q7RTY8 843 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 CALR3Q96L12 384 aaKnown RBP22.19■■□□□ 1.14
UBA3-206ENST00000464605 HERPUD2Q9BSE4 406 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 BRD8Q9H0E9 1235 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 NLGN3Q9NZ94 848 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 PCDHA3Q9Y5H8 950 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 CSNK1G3Q9Y6M4 447 aa22.19■■□□□ 1.14
UBA3-206ENST00000464605 LY6G6EA0A0G2JKS1 128 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 GRID2IPA4D2P6 1211 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 K7ESM1 405 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 PPP1R12AO14974 1030 aaPredicted RBP22.18■■□□□ 1.14
UBA3-206ENST00000464605 GCATO75600 419 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 CAPNS1P04632 268 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 CYP2A6P11509 494 aaPredicted RBP22.18■■□□□ 1.14
UBA3-206ENST00000464605 CKMT2P17540 419 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 TGM2P21980 687 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 CRTC1Q6UUV9 634 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 TECPR1Q7Z6L1 1165 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 PHACTR4Q8IZ21 702 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 TADA1Q96BN2 335 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 DESI2Q9BSY9 194 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 TRIM10Q9UDY6 481 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 U3KQA8 63 aa22.18■■□□□ 1.14
UBA3-206ENST00000464605 ZFC3H1O60293 1989 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms