RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	STRA6	Q9BX79	667 aa		4.17	□□□□□ -1.74
PTPN12-210	ENST00000464313	C1QTNF5	Q9BXJ0	243 aa		4.17	□□□□□ -1.74
PTPN12-210	ENST00000464313	ASAH2	Q9NR71	780 aa		4.17	□□□□□ -1.74
PTPN12-210	ENST00000464313	WWOX	Q9NZC7	414 aa		4.17	□□□□□ -1.74
PTPN12-210	ENST00000464313	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-210	ENST00000464313	NOTCH4	Q99466	2003 aa		4.17	□□□□□ -1.74
PTPN12-210	ENST00000464313		A0A1B0GVM2	712 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	LINC01553	A4QN01	128 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	FAM90A10P	A6NDY2	464 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	ASAP2	O43150	1006 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	MTA2	O94776	668 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	NKX2-2	O95096	273 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	NDUFB4	O95168	129 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	CCNDBP1	O95273	360 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	DDX58	O95786	925 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	MLYCD	O95822	493 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	SCGB1D1	O95968	90 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	LAMP2	P13473	410 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	PSMA4	P25789	261 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	CHAT	P28329	748 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	CDC25A	P30304	524 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	HOXD3	P31249	432 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	ARL3	P36405	182 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	AMT	P48728	403 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	PGGT1B	P53609	377 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	ST3GAL1	Q11201	340 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	NAE1	Q13564	534 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	DRAP1	Q14919	205 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	EFNB3	Q15768	340 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	CCNG2	Q16589	344 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	HYI	Q5T013	277 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	KIAA1161	Q6NSJ0	714 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	B3GNT6	Q6ZMB0	384 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	C9orf47	Q6ZRZ4	202 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	IKBIP	Q70UQ0	350 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	MTSS1L	Q765P7	747 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	FJX1	Q86VR8	437 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	SCCPDH	Q8NBX0	429 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	MIB2	Q96AX9	1013 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	FAM149B1	Q96BN6	582 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	OTULIN	Q96BN8	352 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	MUC13	Q9H3R2	512 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	ESRP2	Q9H6T0	727 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	PLEKHA5	Q9HAU0	1116 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	DIAPH3	Q9NSV4	1193 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	IL36RN	Q9UBH0	155 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	CNOT8	Q9UFF9	292 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	SLCO3A1	Q9UIG8	710 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	FBXO9	Q9UK97	447 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	CDC14A	Q9UNH5	594 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	STON1	Q9Y6Q2	735 aa		4.16	□□□□□ -1.74
PTPN12-210	ENST00000464313	TMEM202	A6NGA9	273 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	PRSS47	A8MTI9	375 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	HSPA12A	O43301	675 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	HNRNPCL1	O60812	293 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	PTP4A3	O75365	173 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	OAZ2	O95190	189 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	VNN2	O95498	520 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	EIF2S1	P05198	315 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	HOXB5	P09067	269 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	ACADM	P11310	421 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	RARG	P13631	454 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	C21orf33	P30042	268 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	MLH1	P40692	756 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLCN3	P51790	818 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	GOLGA8DP	Q0D2H9	430 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	FOXD4	Q12950	439 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	CSTF3	Q12996	717 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	TRAF3	Q13114	568 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	EIF4A2	Q14240	407 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	PAPPA-AS1	Q5QFB9	102 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	NCEH1	Q6PIU2	408 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	C4orf50	Q6ZRC1	276 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	NEK10	Q6ZWH5	1172 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	LINGO2	Q7L985	606 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	AGBL3	Q8NEM8	1001 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	OR14A16	Q8NHC5	309 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	B4GALNT2	Q8NHY0	566 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	CREB3L4	Q8TEY5	395 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	ARHGEF2	Q92974	986 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	PPP1R13B	Q96KQ4	1090 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	MAP7D2	Q96T17	732 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	KCNN2	Q9H2S1	579 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC28A3	Q9HAS3	691 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	GPR108	Q9NPR9	543 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	SEPT11	Q9NVA2	429 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	HIF1AN	Q9NWT6	349 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC9A2	Q9UBY0	812 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	RCOR1	Q9UKL0	485 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	PCDHA7	Q9UN72	937 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	CEPT1	Q9Y6K0	416 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	CKAP5	Q14008	2032 aa		4.15	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM237A	A0A1B0GTK4	181 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	FSD2	A1L4K1	749 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	ERVV-2	B6SEH9	535 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	VCY	O14598	125 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms