RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MAGOHBQ96A72 148 aaKnown RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 OXNAD1Q96HP4 312 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 TRIB3Q96RU7 358 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 LYSMD1Q96S90 227 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 ORAI3Q9BRQ5 295 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 PAK5Q9P286 719 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 HS3ST3A1Q9Y663 406 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 GON4LQ3T8J9 2241 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 OTOGLQ3ZCN5 2332 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 VPS13AQ96RL7 3174 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 A6NNZ2 444 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 A8MX80 341 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 VILLO15195 856 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 FGF1P05230 155 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 HNF1BP35680 557 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 FDFT1P37268 417 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 IHHQ14623 411 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 AGERQ15109 404 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 QPCTQ16769 361 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 ALYREFQ86V81 257 aaKnown RBP19.84■□□□□ 0.77
COL9A3-204ENST00000463487 RAVER1Q8IY67 606 aaKnown RBP19.84■□□□□ 0.77
COL9A3-204ENST00000463487 PRELID2Q8N945 189 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 TMEM145Q8NBT3 493 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 ATL2Q8NHH9 583 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 GRK7Q8WTQ7 553 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 MYOCQ99972 504 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 AP1M1Q9BXS5 423 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 EBF2Q9HAK2 575 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 CAPN10Q9HC96 672 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 MAGEE1Q9HCI5 957 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 HACD3Q9P035 362 aa19.84■□□□□ 0.77
COL9A3-204ENST00000463487 C1orf232A0A0U1RR37 186 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 LOC285095A0A1B0GVY8 99 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 ERI2A8K979 691 aaKnown RBP19.83■□□□□ 0.77
COL9A3-204ENST00000463487 PATE3B3GLJ2 98 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 E7EVH7 732 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 ARHGAP33O14559 1287 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 TOR1BO14657 336 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 WNT9AO14904 365 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 ZNF185O15231 689 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 TUBB4AP04350 444 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 RABIFP47224 123 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 LMAN1P49257 510 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 CSNK1EP49674 416 aaKnown RBP19.83■□□□□ 0.77
COL9A3-204ENST00000463487 IRX4P78413 519 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 SEMG2Q02383 582 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 SF3A2Q15428 464 aaKnown RBP19.83■□□□□ 0.77
COL9A3-204ENST00000463487 CNGA3Q16281 694 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 LRRC66Q68CR7 880 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 DENND2CQ68D51 928 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 SYT10Q6XYQ8 523 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 DCP2Q8IU60 420 aaKnown RBP19.83■□□□□ 0.77
COL9A3-204ENST00000463487 KLHDC7BQ96G42 594 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 MRGPRX2Q96LB1 330 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 SMOC1Q9H4F8 434 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 TRABDQ9H4I3 376 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 LRRC40Q9H9A6 602 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 PARD6AQ9NPB6 346 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 FZD3Q9NPG1 666 aa19.83■□□□□ 0.77
COL9A3-204ENST00000463487 LNP1A1A4G5 178 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 KIF2AO00139 706 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-204ENST00000463487 DFNA5O60443 496 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 PHF2O75151 1096 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 RECQL5O94762 991 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-204ENST00000463487 CER1O95813 267 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 LHCGRP22888 699 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 FNTAP49354 379 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 FGL2Q14314 439 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 SLC1A5Q15758 541 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 CYP1B1Q16678 543 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 FAM182AQ5T1J6 154 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 TCEAL6Q6IPX3 200 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 CRTC1Q6UUV9 634 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 KYAT3Q6YP21 454 aaKnown RBP19.82■□□□□ 0.76
COL9A3-204ENST00000463487 TCEAL3Q969E4 200 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 NUS1Q96E22 293 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 CAPZA3Q96KX2 299 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 C16orf45Q96MC5 204 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-204ENST00000463487 EDEM2Q9BV94 578 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 FICDQ9BVA6 458 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 ZFYVE1Q9HBF4 777 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 GDF3Q9NR23 364 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 PKD2L2Q9NZM6 624 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 ANKRD6Q9Y2G4 727 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 COQ6Q9Y2Z9 468 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 MYO15AQ9UKN7 3530 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 PLXNA2O75051 1894 aa19.82■□□□□ 0.76
COL9A3-204ENST00000463487 PI4KAP42356 2102 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 A0A1B0GVT2 93 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 TLR4O00206 839 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 GAS8O95995 478 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 ENGP17813 658 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 GRIK2Q13002 908 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 SIRPB2Q5JXA9 342 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 CCDC137Q6PK04 289 aaKnown RBP19.81■□□□□ 0.76
COL9A3-204ENST00000463487 PTAR1Q7Z6K3 402 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-204ENST00000463487 LINC00523Q86TU6 105 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 TSPAN33Q86UF1 283 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 OXR1Q8N573 874 aa19.81■□□□□ 0.76
COL9A3-204ENST00000463487 SLC25A41Q8N5S1 370 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms