RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 IL1AP01583 271 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 TNNT1P13805 278 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 CTPS1P17812 591 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 BDNFP23560 247 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 CENPAP49450 140 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 SLC18A2Q05940 514 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 CUL4BQ13620 913 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 LPIN1Q14693 890 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 TIGD6Q17RP2 521 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 SH2D4BQ5SQS7 431 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 ZNF772Q68DY9 489 aaPredicted RBP4.36□□□□□ -1.71
UBA3-204ENST00000461522 TYW3Q6IPR3 259 aaKnown RBP4.36□□□□□ -1.71
UBA3-204ENST00000461522 SPICE1Q8N0Z3 855 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
UBA3-204ENST00000461522 THAP4Q8WY91 577 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 MASTLQ96GX5 879 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 ADGRG7Q96K78 797 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 RPS6KC1Q96S38 1066 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 CHMP4BQ9H444 224 aaKnown RBP4.36□□□□□ -1.71
UBA3-204ENST00000461522 RTL1A6NKG5 1358 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 BLMP54132 1417 aaPredicted RBP4.36□□□□□ -1.71
UBA3-204ENST00000461522 ABCC6O95255 1503 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 TOPAZ1Q8N9V7 1692 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 PRSS47A8MTI9 375 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 BUB3O43684 328 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 SERPINC1P01008 464 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 F7P08709 466 aaPredicted RBP4.35□□□□□ -1.71
UBA3-204ENST00000461522 MYF6P23409 242 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 PPP2R1AP30153 589 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 HOXC9P31274 260 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 FMO4P31512 558 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 MYBPHQ13203 477 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 SNTA1Q13424 505 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 UBE4AQ14139 1066 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 SF3B4Q15427 424 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBA3-204ENST00000461522 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 DCAF6Q58WW2 860 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 FAM83BQ5T0W9 1011 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 RETSATQ6NUM9 610 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 UNC5CLQ8IV45 518 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 NGEFQ8N5V2 710 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 ZMIZ2Q8NF64 920 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 RASSF8Q8NHQ8 419 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 LTV1Q96GA3 475 aaPredicted RBP4.35□□□□□ -1.71
UBA3-204ENST00000461522 CFAP53Q96M91 514 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 NPLQ9BXD5 320 aaPredicted RBP4.35□□□□□ -1.71
UBA3-204ENST00000461522 PNNQ9H307 717 aaKnown RBP4.35□□□□□ -1.71
UBA3-204ENST00000461522 CHODLQ9H9P2 273 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 DAAM1Q9Y4D1 1078 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 MAP3K19Q56UN5 1328 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 SLIT3O75094 1523 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 MED1Q15648 1581 aaPredicted RBP4.35□□□□□ -1.71
UBA3-204ENST00000461522 ROBO1Q9Y6N7 1651 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 ITSN1Q15811 1721 aa4.35□□□□□ -1.71
UBA3-204ENST00000461522 CCDC189A1A4V9 331 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 CYSRT1A8MQ03 144 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 CH25HO95992 272 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 ADAP00813 363 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 TK1P04183 234 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 UMODP07911 640 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 TTKP33981 857 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 ADD2P35612 726 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 HNF1BP35680 557 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 RPL3P39023 403 aaKnown RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 AMPHP49418 695 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 AARSP49588 968 aaKnown RBP eCLIP4.34□□□□□ -1.71
UBA3-204ENST00000461522 CYP4A11Q02928 519 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 FBXO43Q4G163 708 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 PLEKHO1Q53GL0 409 aaPredicted RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 CBWD5Q5RIA9 395 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 NAPEPLDQ6IQ20 393 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 DENND6AQ8IWF6 608 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 PGBD5Q8N414 524 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 AADATQ8N5Z0 425 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 RFWD2Q8NHY2 731 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 TRIB2Q92519 343 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 RNFT2Q96EX2 444 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 HES6Q96HZ4 224 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 RBM17Q96I25 401 aaKnown RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 INPP4AQ96PE3 977 aaPredicted RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 NAP1L4Q99733 375 aaKnown RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 TAGLN3Q9UI15 199 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 NUDCQ9Y266 331 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 NFS1Q9Y697 457 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 FLT4P35916 1363 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 KIAA0232Q92628 1395 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 SMG6Q86US8 1419 aaKnown RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 COL16A1Q07092 1604 aaPredicted RBP4.34□□□□□ -1.71
UBA3-204ENST00000461522 NHSL1Q5SYE7 1610 aa4.34□□□□□ -1.71
UBA3-204ENST00000461522 COL22A1Q8NFW1 1626 aaPredicted RBP4.33□□□□□ -1.72
UBA3-204ENST00000461522 SLIT2O94813 1529 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 A0A0B4J293 547 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 MAGEA13PA6NCF6 341 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 NPIPB11E5RHQ5 1161 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 J3KR12 359 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 VNN2O95498 520 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 ARSFP54793 590 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 GOLGA8FQ08AF8 430 aa4.33□□□□□ -1.72
UBA3-204ENST00000461522 LMOD3Q0VAK6 560 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms