RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 PTP4A2Q12974 167 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 INTS6LQ5JSJ4 861 aaKnown RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CLNKQ7Z7G1 428 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 RGL4Q8IZJ4 473 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 NXNL1Q96CM4 212 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CFAP97Q9P2B7 532 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 C2orf71A6NGG8 1288 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CCL22O00626 93 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 PKMP14618 531 aaKnown RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 YBEYP58557 167 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 SKP1P63208 163 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 HNRNPABQ99729 332 aaKnown RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 ZFYVE1Q9HBF4 777 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 WRAP73Q9P2S5 460 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 TMCO1Q9UM00 188 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 COQ4Q9Y3A0 265 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 C2CD4BA6NLJ0 364 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 E9PAM4 449 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 TRAFD1O14545 582 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 NAA20P61599 178 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 USP46P62068 366 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 TNK2Q07912 1038 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 RSBN1Q5VWQ0 802 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 TAPT1Q6NXT6 567 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 OR52E6Q96RD3 313 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 MYL12BO14950 172 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 NDST3O95803 873 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 UGT2B4P06133 528 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 RHOQP17081 205 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 AMD1P17707 334 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CORO1AP31146 461 aaKnown RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 TLX1P31314 330 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 IFNGR2P38484 337 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 GLUD2P49448 558 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 NAIF1Q69YI7 327 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 ZNF567Q8N184 647 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CAMKK1Q8N5S9 505 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CD101Q93033 1021 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CXorf40BQ96DE9 158 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 AHCYL2Q96HN2 611 aaKnown RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 NPAS2Q99743 824 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 SH3GL2Q99962 352 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 BRD9Q9H8M2 597 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 SIX2Q9NPC8 291 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 KIAA1522Q9P206 1035 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 C3orf18Q9UK00 162 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 ZNF232Q9UNY5 417 aa11.75□□□□□ -0.53
SMARCAD1-204ENST00000457823 CNTRLQ7Z7A1 2325 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 LOC100506127A0A0U1RQW1 187 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 RFXANKO14593 260 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 AP2A1O95782 977 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 MT-CYBP00156 380 aaPredicted RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 GLUD1P00367 558 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 IDO1P14902 403 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 DSC2Q02487 901 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 SMARCB1Q12824 385 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 EPS8Q12929 822 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 GNA13Q14344 377 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 TSNQ15631 228 aaKnown RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 CCDC92Q53HC0 331 aaPredicted RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 HECTD2Q5U5R9 776 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 ZNF544Q6NX49 715 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 ZNF549Q6P9A3 640 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 LINGO4Q6UY18 593 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 KBTBD2Q8IY47 623 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 TSSK3Q96PN8 268 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 KLHL1Q9NR64 748 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 EVLQ9UI08 416 aaPredicted RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 RPS6KA6Q9UK32 745 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 GPSM3Q9Y4H4 160 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 NR2E3Q9Y5X4 410 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 DHRS12A0PJE2 317 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 SLC28A1O00337 649 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 NRP2O60462 931 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 SNUPNO95149 360 aaKnown RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 ELFN1P0C7U0 828 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 L1CAMP32004 1257 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 NRG1Q02297 640 aaPredicted RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 KLF10Q13118 480 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 GRM3Q14832 879 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 LYPLAL1Q5VWZ2 237 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 CLIP3Q96DZ5 547 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 SYT17Q9BSW7 474 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 FZD8Q9H461 694 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 MAPRE3Q9UPY8 281 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 PCDHGC4Q9Y5F7 938 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 ISM1B1AKI9 464 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 NEDD8-MDP1E9PL57 170 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 IPO13O94829 963 aaKnown RBP11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 SELPP16109 830 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 CHN2P52757 468 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 CREMQ03060 361 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 PDK3Q15120 406 aa11.74□□□□□ -0.53
SMARCAD1-204ENST00000457823 PARP15Q460N3 678 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms