RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PNPLA3Q9NST1 481 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 INTS7Q9NVH2 962 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 VNN3Q9NY84 501 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM181Q9P2C4 612 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SCN8AQ9UQD0 1980 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 LCKP06239 509 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FYNP06241 537 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ZFXP17010 805 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SOX9P48436 509 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 RAD23AP54725 363 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CDH6P55285 790 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ARPC4P59998 168 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SP4Q02446 784 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MYBPC2Q14324 1141 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 DOK7Q18PE1 504 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 LRRC38Q5VT99 294 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 LAMTOR1Q6IAA8 161 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KRT80Q6KB66 452 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CES5AQ6NT32 575 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TIFABQ6ZNK6 161 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ERMP1Q7Z2K6 904 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 RCOR2Q8IZ40 523 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CHDHQ8NE62 594 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SHCBP1Q8NEM2 672 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 OR4M2Q8NGB6 313 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM143Q96AN5 459 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TOE1Q96GM8 510 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 DMRTB1Q96MA1 342 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 HDHD5Q9BXW7 423 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 RSPO3Q9BXY4 272 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MINDY3Q9H8M7 445 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 VPS28Q9UK41 221 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SARDHQ9UL12 918 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 EXOC7Q9UPT5 735 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 PRELID1Q9Y255 219 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 PCDHGA10Q9Y5H3 936 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 A0A096LPI6 279 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 A0A096LPK6 155 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TTC24A2A3L6 582 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 GIPC1O14908 333 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 HNRNPDLO14979 420 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KRT37O76014 449 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MAPTP10636 758 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KRT3P12035 628 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CDH1P12830 882 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 C21orf33P30042 268 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 GRIA4P48058 902 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TAS2R39P59534 338 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 COPZ1P61923 177 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TFAMQ00059 246 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 LMNB2Q03252 620 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CTBP1Q13363 440 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 DGKDQ16760 1214 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SYT16Q17RD7 645 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KLHL38Q2WGJ6 581 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 VPS26BQ4G0F5 336 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TTC33Q6PID6 262 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 GPR141Q7Z602 305 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 NRARPQ7Z6K4 114 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 GALNT10Q86SR1 603 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CYP4Z1Q86W10 505 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 ANKRD13BQ86YJ7 626 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SCUBE3Q8IX30 993 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 FBXL6Q8N531 539 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SPPL2BQ8TCT7 592 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KCTD4Q8WVF5 259 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 BTN2A3PQ96KV6 586 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 KCNK16Q96T55 309 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SEZ6LQ9BYH1 1024 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CLPBQ9H078 707 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TOR3AQ9H497 397 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 VRTNQ9H8Y1 702 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 CCM2LQ9NUG4 571 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 MTRRQ9UBK8 725 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEFF2Q9UIK5 374 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 USP18Q9UMW8 372 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 SNX6Q9UNH7 406 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 THSD7AQ9UPZ6 1657 aa4.56□□□□□ -1.68
DEPDC1-202ENST00000456315 INPP4BO15327 924 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 CIB2O75838 187 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 PAPSS2O95340 614 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 EGFRP00533 1210 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 MAP2K4P45985 399 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 OR4D2P58180 307 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 MAPRE1Q15691 268 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 STXBP2Q15833 593 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 INAQ16352 499 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 LRRC26Q2I0M4 334 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 NOL9Q5SY16 702 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 EEF1DP3Q658K8 133 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM135Q86UB9 458 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 XYLT1Q86Y38 959 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 SCML4Q8N228 414 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 NPWQ8N729 165 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 ESAMQ96AP7 390 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 WBP1Q96G27 269 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 NSUN5Q96P11 429 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 MYOCQ99972 504 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms