RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 PRELID2Q8N945 189 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 FAM71DQ8N9W8 422 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 ATL2Q8NHH9 583 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 COG1Q8WTW3 980 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 C1orf54Q8WWF1 131 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 RLN3Q8WXF3 142 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 ATG4AQ8WYN0 398 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 MAGOHBQ96A72 148 aaKnown RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 IFT43Q96FT9 208 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 MCCC1Q96RQ3 725 aaPredicted RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 GPR174Q9BXC1 333 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 C1QTNF7Q9BXJ2 289 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PCDH9Q9HC56 1237 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PAK5Q9P286 719 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 SERGEFQ9UGK8 458 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 MBD1Q9UIS9 605 aaPredicted RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 GMEB2Q9UKD1 530 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 SMG5Q9UPR3 1016 aaKnown RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PPIL1Q9Y3C6 166 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 FADS3Q9Y5Q0 445 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 CEP192Q8TEP8 1941 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 NUMA1Q14980 2115 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 ABCA7Q8IZY2 2146 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3DA0A087WVF3 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3IA0A087WXS9 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3EA0A087X179 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3KA0A087X1G2 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 A0A0J9YYE9 177 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3FA6NER0 549 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3LB9A6J9 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 AP3B1O00203 1094 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 LATO43561 262 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 LRP3O75074 770 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 EPN2O95208 641 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 NDST3O95803 873 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TRBC1P01850 177 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 LMNAP02545 664 aaKnown RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 RETP07949 1114 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 MMP2P08253 660 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3HP0C7X1 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 GNSP15586 552 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF30P17039 623 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 HLA-DPA1P20036 260 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 BCKDHBP21953 392 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 GKP32189 559 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 ACSL1P33121 698 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 CD68P34810 354 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TAS2R38P59533 333 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 CDK18Q07002 472 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 PEAR1Q5VY43 1037 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3GQ6DHY5 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3CQ6IPX1 549 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 PRR23BQ6ZRT6 265 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 SYDE1Q6ZW31 735 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 DPPA4Q7L190 304 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 GSTA5Q7RTV2 222 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 ADAT2Q7Z6V5 191 aaKnown RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 CREG2Q8IUH2 290 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TBC1D3Q8IZP1 549 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 DENND6BQ8NEG7 585 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 CEP76Q8TAP6 659 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 CXorf40AQ8TE69 158 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 PDCD6IPQ8WUM4 868 aaKnown RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 DNASE2BQ8WZ79 361 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 SLCO2A1Q92959 643 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 SKA1Q96BD8 255 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 ERLEC1Q96DZ1 483 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 SCRN2Q96FV2 425 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 MS4A14Q96JA4 679 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 C16orf45Q96MC5 204 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 HSPA12BQ96MM6 686 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 LYSMD1Q96S90 227 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TMEM121Q9BTD3 319 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 FSD1LQ9BXM9 530 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 CEP41Q9BYV8 373 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TRABDQ9H4I3 376 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 HACD3Q9P035 362 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.75□□□□□ -1.01
COL28A1-205ENST00000453441 PCDHGC4Q9Y5F7 938 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 R4GN57 208 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 TRPM6Q9BX84 2022 aa8.75□□□□□ -1.01
COL28A1-205ENST00000453441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 LOC285095A0A1B0GVY8 99 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 RGSL1A5PLK6 1076 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 CAPN8A6NHC0 703 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 ANKRD66B4E2M5 251 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 TOR1BO14657 336 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 NDC80O14777 642 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 MAGEC1O60732 1142 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 PCDH8O95206 1070 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 IFNB1P01574 187 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 FGF1P05230 155 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 CD27P26842 260 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 VIPR1P32241 457 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms